Camellia sinensis (tea plant): 114259663
Help
Entry
114259663 CDS
T07364
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114259663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114259663
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114259663
Spliceosome [BR:
csin03041
]
Complex C
Other components
Step II factors
114259663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
RRM_DEAH11
KH_DEAH11_1st
KH_DEAH11
Helicase_C
DEAD
OB_NTP_bind
IBR
zf-C3HC4_2
AAA_22
zf-RING_UBOX
AAA_19
zf-C3HC4
HA2_C
zf-RING_2
KH_SLS1_1
WHD_HA2
Rcat_RNF216
KH_1
RsgA_GTPase
ABC_tran
KH_Vigilin
AAA_30
nSTAND_NTPase5
ResIII
Motif
Other DBs
NCBI-GeneID:
114259663
NCBI-ProteinID:
XP_028055489
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
NPTPHNFFVNPTGLVAGILFFRHRTDAAEAIVFFWERRIAGDHFMTPVSEVLDDKLQERV
KGLFVSHVESLLEGEVMQRMVKKREVLQNEAENLSARLRKPQKLGLLFGDLPGKAKGLRD
EIGLITNRMEEFRSAMKWVLNYLQGNNSKDSVISGETEVFKFEDGLDLSRIHCIVMRECR
RLEEGLPIYGFRLEIIRKVLSEQVMVLIGETGSGKSTQLVQFLADSGLGASGSIVCTQPR
KIAAVSLAKRVGEETNGCYEGNSIICYPTYSHVQAFKSKVIFMTDHCLLQHYMNNKNLSG
ISCIIIDEAHERSLNTDLLLALLKELLCQRGDLRLIIMSATVDASKISDYFYGCGTFHVV
GRSFPVEINYVPGEYGGTSGTLKSSSGNLAPYVFDVVKMVTEIHKSENEGAILAFLTSHM
EVDWARENFQSPSVVSLALHGKLSHEEQCRVFQDYPGKRKVIFATNLAETSLTIPGVKYV
IDSGMVKERWFDSSSGMNVLRVSWISQSSANQRAGRAGRTEPGKCYRLYSDCDYQSMLLH
QEPEIRKVHLGIAVLRILALGIKNVQEFNFVDAPSAKAIDMAIRNLVQLGAIISKNDAFD
LTEDGHCIVKLGIEPRLGKLVLDCCQHQLCREGVILAAVMANASSIFCRVGTSDDKLKAD
CIKVQFCHRGGDLFTLLSVYKEWECMPRGSQNKWCWENSVNAKSMRRCYDAVLELESCLK
NELSITVPSFWLWNPDVVSEHDKWMKKAILSSLAENVAMYSGYDRLGYEVALTGEHFKLH
PSCSLLAYGQKPSWVVFSEMLSTPNQYLVCVTAFDYDSLFSISPPPPFNILQLQSRKLQV
RVITGFSSAVLKRFRGKSNNSLLRHVSRIQTTFMDERIGIEIDADKDEIHLFASSEDIER
VLSLLTDALAYEKKLLRNECLEKCLHHGGQPGVTPPVALFGAGAEIKHLELEQRYLTVDV
FHSKVNSFDDKELLIFFENFVSGVCGFHKFTLSGQDGEDNEKWGRITFFTPVAAQKAVEL
NGVEFCGSSLKVAPAWACVVGDHRMSSFPAVRAKVFWPRRHSKGFAIVKCERNDVDFIVS
DCTNILIGGRLIYCEIDRKCMDSVVIRGIDRETSEPEILEILRMATDRKILDLFLVRGAA
VDDPPCGSCEAALRKELAPFMPSNSPLSNFCYVKVFRPEPKDNFMKALITFDGRLHLEAA
KALHHIEGKALAGCLSWQKIQCQQLFHSSLSCPAPVYVVIKRQLDSLFNSFKHRSGVSYN
LERTEYGSYRVKISANATKAVAELRKPLEQLMKGKLVTHDSLTPTILQLLFSREGIMLMK
SVQQETGTYIFFDRQNLNVRVFGSEDKVALAAKKLVQSLLTLREDKPLEICLRNRVLPHD
LMKKVVEKFGPDIRGLKEKVPEAELTLDVKHHVICVRGSKEVKQAAEKVIYEFACSLNVN
DLEEHPGGEASTCPICLCEVEDSYQLAACGHEFCQSCLVEQLESAIKSRDGFPLGCAREM
CGEHILLMDLRSLLSCEKLEELFRASLGAFVASSGGKYKFCPSPDCPSVYRVAEPGATCW
PFACGACYAETCTGCHLEYHPFISCERYKEFKEDPDSSLKEWCQGKEHVKSCPVCGYMIE
KVDGCNHIECRCGKHICWVCLECFCNSDDCYVHLRSVHHAII
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
aaccctacccctcacaacttctttgtcaatcccaccggtctcgtcgccggaattttgttt
ttccgccaccgtactgatgccgccgaagctattgttttcttctgggaacgccggatcgcc
ggcgatcatttcatgactccggtgtctgaggttttggatgataaattgcaggagagagtg
aagggtttgtttgtttctcatgtggagagtttattggaaggagaggttatgcagaggatg
gtgaaaaagagggaggttttgcagaatgaggctgagaatctctctgctcggcttcggaag
ccgcagaaattgggtttgttattcggtgacttgccggggaaggctaaaggtttgcgagat
gagattgggttgattacgaataggatggaagaatttaggtctgctatgaagtgggttctt
aattatcttcaaggaaacaactctaaagattcggtaattagtggtgaaactgaggttttt
aagtttgaggacggtttggatttgagtagaattcattgtattgtgatgcgtgagtgtcga
agactcgaagagggattgccaatttatggattccgacttgaaatcattcgcaaagtcctt
tcggaacaggtaatggtcttgattggagagactggttcagggaagagcacacagttggtt
cagtttctggctgattcaggacttggtgctagtggttcaatagtatgcacccagccccgc
aaaattgctgctgtctctttggcaaaaagggttggtgaagaaactaacgggtgttatgaa
ggtaattcaatcatttgttatccaacatattctcatgttcaggcattcaagtccaaggta
atatttatgactgaccactgtttacttcaacattacatgaacaataagaatctgtctgga
atttcatgcatcattatagatgaagctcatgaaaggagcttgaatactgatctcctgttg
gctctgttaaaagagttactttgtcagaggggtgatttaaggctcataataatgtctgca
acagttgatgcaagcaaaatttcggattacttttatggttgtggaacctttcatgtggtt
gggagaagctttcctgttgaaatcaattatgttccaggtgaatatggagggacttctggc
actttaaaatccagttctggtaatttagctccatatgtttttgatgttgttaagatggtt
actgagatccataaatcagaaaatgaaggggctattcttgcctttttgacttctcatatg
gaagttgactgggctcgtgaaaatttccagtctccctctgttgtctcgttagctttacat
ggaaaactatcccatgaagagcaatgtcgtgtattccaggactaccctggaaagagaaaa
gttatttttgccacgaatttagcagagacatccttgactattcctggtgtcaagtatgta
attgattctggcatggtaaaggagcgctggtttgattcaagtagtggtatgaatgtccta
agagtttcctggatcagccagagttcagctaaccagcgagctggccgtgctggccgaaca
gaacctggaaagtgttaccggctctattcggactgtgattatcagtctatgcttttacat
caggagcctgaaattcgtaaagttcacctaggcattgcagttctaagaattcttgcctta
gggattaagaatgtacaggaatttaattttgttgatgcccccagtgccaaggcaattgac
atggccatcagaaaccttgtgcagttaggggctatcatatccaaaaatgatgcttttgat
ttaactgaggatggacattgtatagttaaactgggtattgagcctcggcttggaaaactt
gttcttgactgctgtcaacatcagttgtgtagagagggtgtcatacttgctgctgttatg
gcaaatgcaagtagcatattttgcagagttggtactagtgatgataaattaaaagctgat
tgtattaaggtacaattctgccatcgtggtggagatctgttcactctgctttctgtctac
aaggaatgggaatgtatgcctcgagggagtcaaaataaatggtgttgggaaaatagtgtc
aatgcgaagtctatgcgtagatgctatgatgctgtactagaattagaaagttgtcttaaa
aatgagctaagcatcactgttcctagtttctggctttggaatcctgacgttgtttctgaa
catgataaatggatgaagaaagcgatactttcttccttggcagaaaatgtagccatgtac
tctggatatgatcgtcttggttatgaggtggctttaactggagaacattttaaacttcat
ccttcatgttcattgcttgcatatggtcagaagcctagctgggttgtattttcggaaatg
ctatctacgccaaatcaatatttggtctgtgtaactgcttttgactatgactctttgttt
tccattagtcctcctcctccattcaatatcttacagctgcagagtcggaagctgcaggta
agggtgattactggattttcaagtgcggttctaaagagattccgtgggaaatcaaacaat
agtttacttcgtcatgtttctcgcattcaaacaaccttcatggatgaacgaattggtatt
gaaattgatgctgataaggatgaaattcacttatttgcctcttcagaagacattgaaagg
gttctcagccttctgacagatgccttggcatacgaaaagaaattgttgagaaatgaatgc
ttggaaaaatgtctacatcatgggggccagcccggtgttactcccccagtggcattgttt
ggagctggtgctgaaattaagcatctggagttggagcagagatatttgactgtggatgtg
tttcattcaaaggtgaattcttttgatgacaaggagcttttaatattctttgagaatttt
gtctctggagtatgtggttttcacaagttcactctcagtggacaagatggtgaagacaat
gaaaagtggggcaggataacatttttcactcctgttgcagctcaaaaagctgttgagtta
aacggtgttgaattttgtggctcttcactaaaggttgcccctgcttgggcatgtgtggtg
ggtgatcatagaatgtcatcatttcctgcagtaagagccaaagtgttttggccccgtagg
cacagcaagggctttgcaatagttaaatgtgaaaggaatgatgttgattttattgttagt
gattgcactaacattctgattggaggtaggcttatttactgtgagatcgatagaaagtgc
atggattctgttgtcatcagaggtatagatagagaaacttcggaaccagaaattctagaa
atcttgagaatggccacagataggaaaattctggatttatttctcgtaagaggagctgct
gttgatgatccaccatgtggttcttgtgaagcagcacttcgtaaagaacttgctccattc
atgcctagcaacagcccattaagcaatttttgctatgtcaaggtcttccgccctgaacca
aaggataacttcatgaaagctttgattacttttgatggaagactgcatttggaggcagcg
aaagctttgcatcatattgaggggaaagcacttgctggatgtctttcgtggcagaagata
cagtgccagcagttgttccatagctctttgtcgtgcccggctcctgtctatgtggtcatt
aagaggcaactagattctttattcaatagctttaagcatcgtagtggtgtatcttacaat
ttggaaaggactgagtatggctcttatcgggtcaagatatctgctaatgctacaaaggca
gtggcagagttgaggaaacctctggagcagctaatgaaaggaaagcttgtgactcatgac
agcctcacgcctactatactgcagcttctcttttcccgagagggtattatgctcatgaaa
tcagtccagcaagaaacaggaacatacattttctttgacaggcagaacctaaatgtaagg
gtctttggttcagaagacaaggttgctttggctgcgaagaaactggtacagtctctttta
actctccgcgaagacaaaccgctggaaatctgtcttcgaaacagagttttgcctcatgat
cttatgaaaaaagtggttgagaagtttgggccagacatacgtgggcttaaggagaaggta
cctgaggctgagttgacccttgatgtgaagcaccatgtcatctgtgtccgtggaagcaag
gaggtgaagcaggcagcagagaaagtaatttatgaatttgcttgctctcttaatgttaat
gatctagaagagcatcctggtggtgaggcctccacctgtcctatctgcttgtgtgaggtc
gaggactcgtatcagctggcagcatgtggacatgagttctgtcaatcgtgcttggttgaa
caactagaatctgcaattaaaagccgtgatgggttcccccttggttgtgcccgtgagatg
tgtggtgagcacatcttgctcatggatttgaggtctctgttatcttgtgaaaagttggaa
gaactcttcagggcttctctgggggcatttgtggcatctagtggtggtaaatacaagttt
tgcccatctcccgactgcccttcagtttacagggtagcggaaccgggggcgacttgttgg
ccgtttgcatgtggggcttgctatgcggaaacatgtactggttgtcacttggagtatcac
ccgttcatatcgtgtgaaaggtacaaggagttcaaggaggacccggactcgtcactgaaa
gaatggtgccaggggaaagagcatgtgaagagctgcccagtctgcgggtacatgatcgag
aaggtggatgggtgcaaccacattgagtgcagatgtgggaaacacatttgctgggtgtgc
ttggaatgcttctgcaacagcgatgactgctatgttcacttgaggtctgtacatcatgct
atcatatga
DBGET
integrated database retrieval system
