Camellia sinensis (tea plant): 114260261
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Entry
114260261 CDS
T07364
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03440
Homologous recombination
csin03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114260261
03450 Non-homologous end-joining
114260261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csin03032
]
114260261
03400 DNA repair and recombination proteins [BR:
csin03400
]
114260261
DNA replication proteins [BR:
csin03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114260261
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114260261
BRCA1-C complex
114260261
NHEJ (non-homologous end-joining)
MRX complex
114260261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
AAA_21
AAA_29
ABC_tran
AAA_13
AAA_16
AAA_27
AAA_22
AAA
DUF7532
Motif
Other DBs
NCBI-GeneID:
114260261
NCBI-ProteinID:
XP_028056144
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
SGHSFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTL
NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKS
QIQELERNIQNVDAKIQHNEVTLKDLRKLEDQISTKTAKRSTLFEEKEKQFAALAEENQD
TDEQLEEWKIKFDVKITESEYKINKWEREVNDTETKSSLLRKKINEYIWDISKLQTEAEA
HVSLCNERDSMIQNLFARHNLGSVPSTSLSNEVALNLTNRIKSRLMDLDRDLEDKKKSNE
LELKVAWDRYMDANDQWKDTEARKQAKVDSKSGLLKRIEEKENERDSFELQISNVNLTDI
DEKEKDMKIMVERKANQLAERKFDSTRRQKQTEIYTIEQEIKSLNREKDIMAADSVDRVK
LSLKKAELENHKKKHKKIMDEIKERVKGVLKGRLPPEKDLKKEIAQALRALGMEFDDLSS
KSREAEKEVNMLQMKIQEVNNNLSKLHKDMDSKKRFIESKVQFLDQQYVSIDSYLQVFDS
AKEKRDVQKSKYNIADGMRQMFDPFERVARAHHICPCCERPFSAEEEDDFVRKQRVKAAS
SAEHMKVLAVESSNADSYFQQLDKLRVVYEEYAKIGKETIPLAEKKMNELNEELDQKSQA
LDDVIVNSGLFYFLFMVLDIMVFAC
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtggataaaatgctgataaagggcatccggagcttcgatcctgagaacaag
aacgtcatcaccttcttcaagcccttaaccctcatcgtcggtcccaacggcgccggcaaa
actactattattgagtgcttgaagctctcttgcactggtgagttgcccccaaatgcccgc
tctggtcacagcttcgtccatgaccccaaggttgcaggtgagacagaaacaaaggggcag
ataaagctccggttcaagacagcagcgggaaaggatgtggtctgtataaggtcatttcag
ctgactcagaaggcatccaagatggagtacaaggcaattgagagtgtgcttcagacactt
aatcctcatacaggagagaaagtttgcctaagctatagatgtgctgacatggatcgtgaa
atccctgctcttatgggtgtctcaaaggctatccttgaaaatgttatatttgtgcatcaa
gatgaggctaactggcctttgcaagatccttctacattgaaaaagaagtttgatgatatc
ttctctgctactaggtacacaaaagccctcgaagttatcaagaagcttcacaaggagcag
gctcaagagataaaaacgtataagctaaaattggagaatcttcaaacattgaaagatgct
gcatacaagcttcgggaaagcatatctcaggatcaagagaaaacagaagcattaaaaagt
caaatacaggagctagaacgaaacattcaaaatgtggatgctaagatccaacacaatgaa
gtaacattaaaagatttgcgaaaacttgaggatcagatatcaaccaagactgctaagaga
agcactttattcgaggaaaaggagaaacaatttgcagctcttgctgaggagaatcaagac
acagatgaacagttggaggaatggaaaatcaagtttgatgtaaagattacagaatcagaa
tataaaattaacaagtgggagagggaagtgaatgacacagagacaaaaagttctttgctt
aggaagaaaattaatgaatatatctgggatatcagcaagcttcaaactgaggcagaagcc
catgtctccttgtgtaatgaaagagattcaatgattcaaaatctttttgcaaggcataat
ttagggtctgttccaagtacttcattgagcaatgaagttgctttgaacctcacaaatcgc
ataaaatcaaggctaatggatcttgatagggacttggaagataaaaagaaatcaaatgaa
ttagaacttaaggtggcatgggatcgctacatggatgcaaatgatcagtggaaagacact
gaggctcgaaaacaagctaaagttgacagcaagagtggtcttctaaaacgtattgaagag
aaggaaaatgaacgtgattcatttgaactgcaaatttctaacgtgaatctgactgacatt
gatgagaaagaaaaggacatgaaaattatggttgagagaaaggcaaaccaacttgctgaa
aggaaatttgactcaactagacgccagaagcagactgagatatacactattgagcaagaa
attaaatctcttaatcgtgagaaagatatcatggctgctgattctgtggacagagttaaa
ctgtctttaaagaaggcagagttggaaaatcacaaaaaaaagcataaaaagataatggat
gaaatcaaagaaagagttaaaggagtactaaaaggaaggcttcctcctgagaaggatctg
aaaaaagaaattgctcaagccctaagggctcttggaatggagtttgacgacttgagctca
aaatctcgtgaagctgaaaaggaggtgaatatgttacagatgaaaatacaagaagttaat
aataacctgtccaaacttcacaaggatatggattccaaaaagagatttattgaatcaaaa
gtccagttcttggatcagcagtatgttagcattgactcttatctccaagtttttgattcg
gctaaagagaaaagagatgtgcaaaaaagcaaatacaacattgctgatggtatgcgacaa
atgtttgatcctttcgaaagagttgcccgtgctcatcacatttgtccttgctgtgagcgc
cctttctcagctgaagaggaagatgattttgttagaaagcaaagggtgaaggctgcaagt
tctgcagagcatatgaaagtgttggctgtggagtcctctaatgctgattcctacttccag
cagttagacaagcttcgtgtggtatatgaagaatatgctaaaattggcaaggaaacaatt
cctcttgcagagaaaaagatgaatgaactaaatgaggagttggatcaaaaatctcaggca
cttgatgatgtaattgtcaattctggtcttttttattttttattcatggttttagatatt
atggttttcgcatgttaa
DBGET
integrated database retrieval system
