Camellia sinensis (tea plant): 114260621
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Entry
114260621 CDS
T07364
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114260621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114260621
03036 Chromosome and associated proteins [BR:
csin03036
]
114260621
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114260621
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114260621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
114260621
NCBI-ProteinID:
XP_028056570
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MPGISSESGESSSLVPFSPEVGDPVVYPLHHGLKPPISRLSISWSRGNSLRVSVFLKPQS
DADDSEIGGKVVEVKLGSGDGEIDDAQWRRIAYGSVSPFALLQSRKNSMSALSKMSASSS
AYEADWWEYVMEYSSDINFLLGGQKLPPSSVIEDPKTILKKVEEPTCLKSAWELLEIFYA
DKHSQAWMPERLLDWLADYDSLLSGTQPTVNSKLVNFQKDLVSLQAIEDDPKYWEAMSSP
LAVGWLDIAVKMLHLHGSYQLDQLGNREIENGLVEAVAVLISKMPRLRPELAPGKLGECY
KTKPDFIKAWEKWRAQLTKLDCSTYWVQCDHNRTKEGLKYLLQIMLGNANILSSSTCNWI
ELHISHLLYIRPFTMGLESMYSLAQKCMQLKPMSSPHKLMGLLIGILAENTEVVLAECSR
SFGPWMVAHAIELLTAGSTQAEILLHEERYNLGGISMEELHRLVYAQVLSSHALTWQIAP
IYLTSCMKQGMGLLEILLYKQPVQHNQLLLKNIEICRLYELDSVSSKIMKIAGVHHWKHG
KKGSGVFWLQQAQDEVCLNRIAQQLFNFVGKSISDESLKQWEGLIELLGSESRTAGGLEF
LHKYRDFKRSLQQVHDGIATDAAQKAVESLISLMKNPSTPQRFWLPLLYDSLKLLNWQDR
PLLNVSQTNLLLNKLQELSMARLRPDFIEADLPSQALSSVRLALATNLGRAILEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccggaatctcatcggagtccggcgaatcatcatctctcgtcccattctcgcctgaa
gtcggagaccccgtcgtctaccccctccaccacggcctcaagcccccaatctctcgcctc
tccatctcttggtcccgcggcaactctcttcgcgtttcggttttcctgaaacctcagtcc
gatgccgatgacagtgaaattgggggcaaagtggtggaggtgaagctcggtagtggagat
ggtgagatcgacgacgcgcagtggcggaggattgcctacggttcggtctcaccgtttgcg
cttcttcagagccggaagaactcgatgtctgcgttgtcgaaaatgtctgcgagctcgtct
gcttatgaagctgattggtgggaatatgttatggagtatagtagtgacataaattttctt
cttggtggtcaaaagttgccacctagttcagtgattgaagacccaaagacaattttaaag
aaagttgaggagccaacctgcttgaaatctgcatgggagttgctggaaatattttatgca
gacaagcattctcaagcttggatgcctgaacggcttcttgattggttagctgattatgat
agcttactgtctggaactcagccaacagttaattcaaaacttgtcaattttcaaaaagat
ctagtcagtttgcaggcaatcgaagatgatcctaaatactgggaagcaatgtcatcacca
ttggcagttggttggctagatattgcggtgaaaatgttgcacttgcatggatcgtatcag
cttgatcagcttggtaaccgtgagatagagaatggactggttgaagcagttgctgttttg
atttcaaaaatgccacgtttgcgtcctgaattggcacctgggaaattaggtgaatgctat
aaaaccaagcctgattttattaaggcatgggagaaatggcgggcacaattaactaagcta
gactgcagtacatactgggttcagtgtgatcacaatcggaccaaggagggcttgaaatac
ttgctacaaatcatgctgggaaatgctaatattctctcctcttcgacatgtaattggata
gagctgcatatttctcacttgttatacattagaccattcactatgggtttagagagcatg
tacagcctagctcagaaatgcatgcagttaaagccaatgtcttctccgcataagttgatg
ggacttttaattggcattctagcggaaaatacagaggttgtgttagcagagtgttcaaga
tcatttggtccttggatggttgcccatgctatagagttgttgacagctgggagcactcaa
gcagaaattcttttacatgaagagcgttacaatctgggaggaatcagcatggaggagctc
catcgacttgtctatgctcaagttctatcttcacatgcattgacttggcaaattgctcca
atatacttgacatcatgtatgaaacaaggaatgggcctgttggagattttgttgtacaag
caacctgtgcagcataatcaattactcctcaagaacatagagatttgccgtctatatgaa
ctagacagtgttagttcaaagataatgaagattgctggagtgcatcactggaagcatgga
aagaaaggttctggagtcttctggcttcagcaagctcaggatgaagtttgtttaaacaga
attgctcagcagttgttcaattttgttggaaagtctatctctgatgaaagtctcaagcaa
tgggaaggattaattgaattgttgggttctgagtcgaggactgctggaggtctcgagttt
ctgcacaagtatagggatttcaaaagatcccttcagcaggttcatgatggaattgctact
gatgccgctcagaaagccgttgaatcccttatatcgcttatgaaaaatccatccacacct
caacggttttggctgcctcttctatatgactcgttaaaattattgaattggcaggatcgt
cctctactgaatgtctctcagactaaccttttgttaaataagctgcaagagttgtccatg
gcaaggctgcgaccagacttcattgaagcagacttgccatctcaggctttgagttctgtc
aggctagctcttgcgactaatctaggacgtgccatcctcgaagaatga
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