Camellia sinensis (tea plant): 114261531
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Entry
114261531 CDS
T07364
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114261531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114261531
Enzymes [BR:
csin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
114261531
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
114261531
DNA repair and recombination proteins [BR:
csin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114261531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
Cwf_Cwc_15
NFACT_N
PPP4R2
NOA36
Autophagy_act_C
RRN3
Motif
Other DBs
NCBI-GeneID:
114261531
NCBI-ProteinID:
XP_028057603
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPELPEVEAARRAIEDHCIGKKIKRSLIADDSKVIDGVSRSDFESSLLGKTIVAAHRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDSDEWPSKYSKLFIELDDGLEL
SFTDKRRFAKVRLLENPASVPPISELGPDALLEPMTIDELINSLSKKKIGIKALLLDQSF
ISGIGNWIADEVLYQAKIHPLQIASSLSKESCVALHKCIKEVIAKAVEVGADSSQFPSSW
IFHSREKKPGKAFVDGKTIEFIAAGGRTTAYVPELQKLSGSQVAKAQIKPRKQTVKKGSK
DVDMDGDLSAPGSEDEENAKSAKSKGGRTMSGRKKPPAKRKLNGSDEDDDDDSNNDDDDD
DDDDDDDDTDQKKKTKTAKKPPAKTKSKKATVKVTRRKK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaggtagaagcagctcgaagagccatcgaagaccactgtatcggc
aagaagatcaagcgatccttgatcgctgacgattccaaggtcatcgatggagtctcgcgt
tctgatttcgaatcctctctcctcggcaagactatcgtcgccgctcatcgcaagggcaag
aacatgtggctccaactcgattcccctccttttccttctttccagttcggaatggctggg
gctatatatattaagggagttgcagttacaaaatataagaggtctgctgtaaatgacagt
gatgagtggccttccaagtattccaagttatttatcgaactagatgatgggttggagctg
tcattcactgataagaggagatttgcaaaagttcgcttgcttgagaatccagcttctgtg
cccccaatttctgagcttggtccagatgcattgttggagcctatgaccattgatgaactt
atcaactccttgagcaagaagaagattggaatcaaggctcttttacttgatcagagtttt
atctcaggtattggcaattggattgcagatgaagtgctataccaagcaaaaattcatccg
ctgcaaattgcctccagcctttccaaagaaagctgcgtagcattgcacaagtgcattaaa
gaggtcattgcaaaagctgttgaagttggggcagatagtagtcaatttcctagtagttgg
attttccattcccgcgaaaagaaacctggcaaggcttttgttgatgggaagacaattgag
tttattgctgctggtggcaggacaacggcatatgtaccagagttacaaaagctgagtgga
tctcaagttgcaaaagcacaaattaaaccgagaaagcaaactgttaagaagggaagcaaa
gatgtggacatggatggtgatcttagtgcaccaggaagtgaggatgaggaaaatgctaaa
agtgcaaaatcaaagggagggaggaccatgagtggacgtaagaaaccgcctgcaaaaaga
aagctaaatggaagcgatgaagatgatgacgacgacagcaataatgatgatgatgatgat
gatgatgacgatgacgacgatgacacagatcagaagaagaaaactaaaacagctaagaag
cctcctgctaaaacaaagtccaagaaagcgacggttaaggtgaccagaagaaaaaaatga
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