Camellia sinensis (tea plant): 114262326
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Entry
114262326 CDS
T07364
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114262326
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
114262326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_like
Beta-prop_LRRK2
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
DUF3311
WDR54
DUF3915
Motif
Other DBs
NCBI-GeneID:
114262326
NCBI-ProteinID:
XP_028058487
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MCQNFQPHLPIWQCYIVLCMLAASKLFCLCLEREKKKLLEREREREREKEMGGIGKEALV
VCSDKSLGIGITIWDIESGENLLHIPTSASPPHGLICLANQCLVASQIHRQGSVAGGVIF
IWPFNKPQAPVRSYPMESIGPITCTKDGTYIVGGAPSGNAYVWEISNGRLVRTWCAHHKS
VTCLTFSSDDSFLISGSEDGMIIIWPMIGLVDETDCWTVPLILNFSLEHSSSITGLLTAS
SGSSSIFLSSSLDGTCKVWDLVTGRLLQTRAFPLPITAIVVDPTDKKLFFGSANGMIFLN
TLDFGVVEDTSIVLEDEPTLLMGHKSVQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaaattttcaaccacatttgccaatttggcaatgttacatagtgctttgcatg
cttgcagcttcaaaactgttttgtctttgtctagagagagaaaagaaaaagttgcttgag
agagagagagagagagagagagagaaagagatgggtggaattggtaaggaggcattggta
gtgtgcagtgacaagagcttggggataggaataacaatatgggacatagagagtggggaa
aatctccttcacataccaaccagtgcttcacctcctcatggactcatctgcttggcaaac
cagtgtcttgtggcttctcagatacacaggcagggctcagttgctggtggggtcatcttt
atttggcccttcaataagcctcaagcaccggtccggagctacccaatggagtccattgga
ccaataacatgcacaaaggatggcacatatattgttggtggagccccttctggaaatgct
tatgtttgggagatttcaaatgggagattggtcaggacttggtgtgcacatcataaatca
gtgacttgcttgacattttctagcgatgattcattccttatttctggttcagaagatggc
atgatcattatttggcctatgatcggtttggtagacgagacagattgttggactgtgcct
ttaatactaaatttttcattagagcattcatcctctataacgggcctattaactgcatca
agtgggtcaagttcaatttttttatcaagctccctcgatggcacatgcaaggtatgggac
ctggttactggaagacttttacaaactcgagcttttccgctaccaattactgcaatagtt
gttgatccaacagacaagaagttattttttggtagcgcaaatggaatgattttcttgaat
acacttgattttggagtggtggaagatacttcaattgttttagaggatgagccaaccttg
ctaatgggacacaagtcagtacaataa
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