Camellia sinensis (tea plant): 114262729
Help
Entry
114262729 CDS
T07364
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114262729
Transcription machinery [BR:
csin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114262729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
114262729
NCBI-ProteinID:
XP_028058900
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MGLKLNVKWGSPVQSPYHLTTSSYCPSSFSSRSKETSYDSARVTFAFVISCQSEASYNGP
LKAHRCPTAPQTSENDYSEMEDIKMNIGKRSHDGLNNTLDDNITMPMGDDKLTFLASLQA
SRASQFGLLLQNLDMLESTFADSDVVRLERDIMVQLERLGALKLFHTCLSRTLKSSTFSD
FSDSPTQLIGELQKNDTADVHSGKIVIPSRKKEERKSRRKRASEKVSGLAFPSKGTQKDQ
KKSALSSVKRLSNSRSRRLKVAKNEAEMARGVKLVEYLEGIRTVLEEETGQVASLSRWAE
AAGVEEKVLKQHLHFGWYCKDELLKSSHSLVVYLARNYRGIGVAFEDLIQAGNFGVLQGA
VRFDHTRGYKFSTYVQYWIRKSISTLVAQHARGIRIPFTLNKAINQIHKARKALSTSQGK
YPGDDEIAKFTGLSLAKITLASKCLRVVGSIDQKVGDFSVKFMELTADKSIKSPEEAVMR
QHMIKEIHGLLNGLGLRERQVLILRFGLGDHQRRSLEEIGRRFCVSKEWIRKIERTALTK
LRDEETCRNLRHYLHL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaagctaaatgtcaaatggggttctccagttcagtccccttaccatctaacc
acttcatcctattgcccttcttcattctcatctagaagcaaggagacttcatatgactca
gcaagggtgacttttgcttttgttatttcctgtcagagtgaggcttcatataatggtcct
ttgaaagcacatagatgtccaactgctcctcaaacctcagaaaatgattactcagaaatg
gaagacataaagatgaatattggcaagaggtcccacgatggcttaaataacacgcttgac
gataacataacaatgcccatgggagatgataagctgacattccttgcaagcttacaagca
agcagggcgtcacaatttggtttattattgcaaaatcttgatatgttggaatcaacattt
gctgattcagatgtggtaaggttggaaagagatattatggtgcaactagaaaggcttgga
gctctaaaattattccatacctgtctgtccaggacccttaaatcttcaactttttctgac
ttctctgactcgccaactcagcttattggagagctccagaagaatgacacggcagatgtt
cactcagggaaaattgtcattccctctagaaagaaggaagaaagaaaatcaagaagaaaa
agagcatcagaaaaggtttccggactggcatttccatcaaaaggcacccaaaaggaccag
aagaaatctgctttatcttctgtaaaaagactatcaaactctagaagtagaagactaaaa
gttgcaaagaacgaggctgaaatggcaagaggggttaagttggtcgaatatttggaagga
atcagaacagtattggaagaagaaactgggcaagtagctagcttgagtagatgggcagaa
gccgctggagttgaggagaaggtattgaagcagcatttacattttggttggtattgtaag
gatgagcttctgaaaagctcacactccttagttgtataccttgcaagaaattacagggga
attggagtggcctttgaagacttaattcaggctgggaattttggtgtcctgcaaggcgca
gtaaggtttgaccacactaggggatacaaattctcaacttatgttcagtactggataagg
aaatcaatctcaacgctggtcgcacagcatgccagagggattcgaattcctttcacatta
aacaaggcaataaatcagatacacaaagctcgaaaggccctaagcacaagccaggggaaa
taccctggtgatgatgaaattgcgaagttcacaggactatccttggcgaaaattactttg
gcaagcaaatgcttgagagtcgtgggttcaattgatcagaaagtgggggatttcagtgtt
aagtttatggagcttacagcagataaatcaataaagagccccgaagaagctgtcatgagg
caacacatgataaaagagatacatggtcttctgaatggcctgggtctgagagagaggcaa
gtgttgatcctaagatttggcctcggtgatcaccagcgcaggtcgcttgaggaaatcggg
agacgtttttgcgtgagcaaagagtggataaggaagatagagaggacggcgctgacaaaa
ctaagagatgaagaaacctgcagaaatttgaggcattatttgcacttatag
DBGET
integrated database retrieval system
