Camellia sinensis (tea plant): 114263179
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Entry
114263179 CDS
T07364
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114263179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114263179
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114263179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
114263179
NCBI-ProteinID:
XP_028059477
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MNSPFGGLGSPASNAIEVNKDRKMQSAEQLVLDLSNPDLRENALLELSKKRELFQDLAPL
LWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHI
PLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGS
ELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRC
YLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQLLYNVQGPRVGLQAGGG
FEHMLVN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaactctccattcggcggactcggatcaccggcctcgaatgctattgaagttaacaag
gatcgcaaaatgcaatctgccgaacagttggtgctcgatctcagcaaccctgatctccgt
gaaaacgcccttctcgagctctccaagaagagagaattatttcaagatttggctccactg
ttgtggaactcttttggtactattgctgcactcttgcaggagatagtttccatatacccc
gtcttatcaccaccaaaccttaccccagcacaatcgaaccgtgtctgcaatgcacttgcc
ctccttcagtgtgtggcctctcacccagacacaagaatgttgttcctcaatgcccacatt
cccttatatctgtacccttttcttaatacaacaagcaaatcaaggccatttgaatactta
aggcttacttccttgggcgtcattggtgctttggtgaaggttgatgatacagaggttatc
agcttccttctctcaacagaaataattccgctgtgcctaaggacaatggagatgggcagt
gaactatcaaaaacagttgcaacattcattgttcaaaaaattttgttggatgatgtgggc
ttggattatatatgtaccacagcagagcggttttttgctgtaggtcgagttttggggaat
atggtggcagcacttgctgaacaaccctcatcacggctgctaaaacatattattcgttgt
tatcttcgactatctgataacccaagggcttgcgatgcattacgaagttgtctgccagac
atgcttagggatgccacctttagtacatgccttcgtgaagatccgacaacgagaaggtgg
ctacagcaattgctttacaatgtccagggacctcgggtcgggttacaggctggaggagga
ttcgaacatatgctggtgaactaa
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