Camellia sinensis (tea plant): 114263749
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Entry
114263749 CDS
T07364
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114263749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114263749
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114263749
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
114263749
NCBI-ProteinID:
XP_028060145
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MDDNLQEQNKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHSENATFIAKT
YYHTTTALRQLGTGSDAISSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG
SPGNLGSFEEILFANNDMQDSPVIVSLTPNFRENGCTIGMGYVDLTKRVLGLAEFLDDSH
FTNVESALIALGCKECLLPVDSAKSSECKPLHDALSRCGMMVTERKKTEFKGRDLVQDLG
RLVKGSIEPVRDFVSGFEFAPGALGSLLSYAELLADESNYGSYSIRQYNLDSYMRLDSAA
MRALNVMESKTDANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDTALRQDLRQHLKRISDMERLMRYLEKRRAVLQHIVKLYQSSIRLPYIKSALERYDGQ
FSSLIKQRYLDPLEFLTDDDHLNKFIGLVEASVDLDQLDNGEYMISSSYDPKLSELRDEQ
ESLEQKIHNLHKQTANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLNTQFIVLE
TRKDGVKFTNTRLKKLGDQYQKILDEYKSCQKELVARVVQTAATFSEVFESLAVLLSELD
VLLSFADLAVSCPTPYTRPDITTSDVGDIVLEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVLCFSFAGTLLSLSIPRKLNSGLFVFFDSHYVLSLSLKQLRG
VSTFMQEMLETAAILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFA
THFHELTALAHENADHETSKKIVGVANYHVSAHIDSSSHKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVSLAREKAAELEDFSPITIIANDTKQDVGSKRKRECDPDDMSRGAARARQ
FLKEFSELPLDKMNVKEALDQVHKLKYDMEKDAVNSLWLQQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttgcaggaacagaacaagcttcctgagctcaaactcgatgctaagcaa
gcgcaagggttcctctcattcttcaaaaccctaccccgtgaccctagggctgttcgattc
tttgatcgccgggattattacaccgctcatagtgagaatgcaactttcattgcaaagaca
tattaccatactactactgctttacgacagctgggtactgggtctgatgctatttctagt
gttagcataagtaaaaacatgtttgagaccattgcccgtgatcttctcttggagagaaca
gaccatactcttgagctgtatgaagggagtggatcgaattggagactagtgaaaagtgga
agccctggaaatctaggcagttttgaagaaattttgtttgccaacaatgacatgcaagat
tctcctgtgattgtttccctcactccaaattttcgtgaaaatgggtgcactattgggatg
ggctatgttgatcttacaaagagagtgcttggattggctgaatttcttgatgacagccac
tttacaaatgtggagtctgctttaattgctcttggttgcaaggaatgccttttgcctgtg
gacagtgctaaatcctcagaatgtaaacctttacacgatgcattgtcaagatgtggcatg
atggtaacagagagaaagaaaactgagtttaaaggaagggatttggtgcaggatcttggt
aggcttgtcaaaggttctatagaaccagttagagattttgtatctgggtttgaatttgct
cctggggcattgggttcattgctatcttatgcagaactacttgctgatgagagcaattat
ggaagttatagtattcgacagtacaatcttgacagctacatgagattagattctgctgcc
atgagggctctaaatgttatggagagcaaaactgatgctaacaaaaattttagtttgttt
ggactcctgaatagaacctgtactgctgggatgggtaaaagattgctgcacatgtggcta
aaacagcctttattagatgtgaatgaaatcaactccaggctagatttggtacaagcattt
gtggaggatactgctcttcgccaggatttgaggcagcatttaaaaagaatttctgatatg
gagcgattgatgcgctatcttgagaagaggagagctgtcttacagcatattgtaaagctt
tatcagtccagcattagacttccatacattaaaagtgccttggaaaggtatgatgggcaa
ttttcatcactaattaagcaaaggtatctggatcccttggaatttttgactgatgatgac
cacttgaataagttcattggccttgtggaagcttctgtagaccttgatcaacttgataat
ggggaatacatgatttcttccagttatgacccaaaattatctgaactcagggatgagcaa
gaatcattggaacagaaaatacacaatttgcataaacaaactgctaatgaccttgacttg
gcagtagataaggctctaaagttagacaagggcacacaatttggacatgtctttagaatt
acaaagaaggaagagccaaaagtaaggaaaaagctcaatacccaattcattgttcttgaa
actcgaaaggatggggtgaagtttacaaatacaaggcttaagaagctaggggatcagtac
cagaagatacttgatgagtataagagttgtcaaaaagagttggttgcccgagtagttcaa
actgctgcaactttctctgaggtctttgagtcattagctgtgttgctttctgaattggat
gtcttacttagttttgctgatctggctgttagttgccccactccctacacacgaccggac
atcaccacttcagatgtgggagatattgtattagaaggaagtagacatccttgtgtcgag
gcacaagattgggtgaattttataccaaatgattgtaaactagtcaggggaaaaagttgg
ttccagattatcacaggtcctaacatgggtggaaaatccacatttatcagacaggtatta
tgtttctcttttgctggaactctgctttctctatccatccctcgcaagttaaatagtgga
cttttcgttttttttgactctcattacgtgctctcgctctctctcaaacagctacgtggg
gtttctaccttcatgcaagaaatgctggagactgctgcaattctgaaaggagctactgac
aagtcactaataatcattgatgagttgggccggggaacatcaacatatgatggattcggt
ttggcttgggccatctgcgagcaccttgttgaagtcattaaagcacctactttgtttgca
acccattttcatgaactcactgcattagctcatgaaaatgccgaccatgagacttcaaag
aaaattgttggtgtggcaaattatcatgtcagtgcacacattgactcatcaagtcacaag
ctgactatgctttacaaggttgagccaggcgcttgtgatcaaagttttggtattcacgtt
gctgaatttgcgaactttcctgaaagtgtggtcagccttgctagagaaaaggctgcagag
ttggaagatttctcacctatcactatcattgcaaatgatactaaacaagatgtgggatct
aaacggaagagagagtgtgaccctgacgatatgtctagaggtgctgcccgggctcgtcaa
ttcttgaaggaattctctgaattgccactagacaagatgaacgtgaaggaggctttggat
caagtacataaattgaagtacgacatggagaaggatgctgtgaactctctctggcttcag
caatttctctag
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