KEGG   Camellia sinensis (tea plant): 114263749
Entry
114263749         CDS       T07364                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    114263749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csin03400]
    114263749
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     114263749
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 114263749
NCBI-ProteinID: XP_028060145
LinkDB
Position
Unknown
AA seq 943 aa
MDDNLQEQNKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHSENATFIAKT
YYHTTTALRQLGTGSDAISSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG
SPGNLGSFEEILFANNDMQDSPVIVSLTPNFRENGCTIGMGYVDLTKRVLGLAEFLDDSH
FTNVESALIALGCKECLLPVDSAKSSECKPLHDALSRCGMMVTERKKTEFKGRDLVQDLG
RLVKGSIEPVRDFVSGFEFAPGALGSLLSYAELLADESNYGSYSIRQYNLDSYMRLDSAA
MRALNVMESKTDANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDTALRQDLRQHLKRISDMERLMRYLEKRRAVLQHIVKLYQSSIRLPYIKSALERYDGQ
FSSLIKQRYLDPLEFLTDDDHLNKFIGLVEASVDLDQLDNGEYMISSSYDPKLSELRDEQ
ESLEQKIHNLHKQTANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLNTQFIVLE
TRKDGVKFTNTRLKKLGDQYQKILDEYKSCQKELVARVVQTAATFSEVFESLAVLLSELD
VLLSFADLAVSCPTPYTRPDITTSDVGDIVLEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVLCFSFAGTLLSLSIPRKLNSGLFVFFDSHYVLSLSLKQLRG
VSTFMQEMLETAAILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFA
THFHELTALAHENADHETSKKIVGVANYHVSAHIDSSSHKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVSLAREKAAELEDFSPITIIANDTKQDVGSKRKRECDPDDMSRGAARARQ
FLKEFSELPLDKMNVKEALDQVHKLKYDMEKDAVNSLWLQQFL
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggatgataatttgcaggaacagaacaagcttcctgagctcaaactcgatgctaagcaa
gcgcaagggttcctctcattcttcaaaaccctaccccgtgaccctagggctgttcgattc
tttgatcgccgggattattacaccgctcatagtgagaatgcaactttcattgcaaagaca
tattaccatactactactgctttacgacagctgggtactgggtctgatgctatttctagt
gttagcataagtaaaaacatgtttgagaccattgcccgtgatcttctcttggagagaaca
gaccatactcttgagctgtatgaagggagtggatcgaattggagactagtgaaaagtgga
agccctggaaatctaggcagttttgaagaaattttgtttgccaacaatgacatgcaagat
tctcctgtgattgtttccctcactccaaattttcgtgaaaatgggtgcactattgggatg
ggctatgttgatcttacaaagagagtgcttggattggctgaatttcttgatgacagccac
tttacaaatgtggagtctgctttaattgctcttggttgcaaggaatgccttttgcctgtg
gacagtgctaaatcctcagaatgtaaacctttacacgatgcattgtcaagatgtggcatg
atggtaacagagagaaagaaaactgagtttaaaggaagggatttggtgcaggatcttggt
aggcttgtcaaaggttctatagaaccagttagagattttgtatctgggtttgaatttgct
cctggggcattgggttcattgctatcttatgcagaactacttgctgatgagagcaattat
ggaagttatagtattcgacagtacaatcttgacagctacatgagattagattctgctgcc
atgagggctctaaatgttatggagagcaaaactgatgctaacaaaaattttagtttgttt
ggactcctgaatagaacctgtactgctgggatgggtaaaagattgctgcacatgtggcta
aaacagcctttattagatgtgaatgaaatcaactccaggctagatttggtacaagcattt
gtggaggatactgctcttcgccaggatttgaggcagcatttaaaaagaatttctgatatg
gagcgattgatgcgctatcttgagaagaggagagctgtcttacagcatattgtaaagctt
tatcagtccagcattagacttccatacattaaaagtgccttggaaaggtatgatgggcaa
ttttcatcactaattaagcaaaggtatctggatcccttggaatttttgactgatgatgac
cacttgaataagttcattggccttgtggaagcttctgtagaccttgatcaacttgataat
ggggaatacatgatttcttccagttatgacccaaaattatctgaactcagggatgagcaa
gaatcattggaacagaaaatacacaatttgcataaacaaactgctaatgaccttgacttg
gcagtagataaggctctaaagttagacaagggcacacaatttggacatgtctttagaatt
acaaagaaggaagagccaaaagtaaggaaaaagctcaatacccaattcattgttcttgaa
actcgaaaggatggggtgaagtttacaaatacaaggcttaagaagctaggggatcagtac
cagaagatacttgatgagtataagagttgtcaaaaagagttggttgcccgagtagttcaa
actgctgcaactttctctgaggtctttgagtcattagctgtgttgctttctgaattggat
gtcttacttagttttgctgatctggctgttagttgccccactccctacacacgaccggac
atcaccacttcagatgtgggagatattgtattagaaggaagtagacatccttgtgtcgag
gcacaagattgggtgaattttataccaaatgattgtaaactagtcaggggaaaaagttgg
ttccagattatcacaggtcctaacatgggtggaaaatccacatttatcagacaggtatta
tgtttctcttttgctggaactctgctttctctatccatccctcgcaagttaaatagtgga
cttttcgttttttttgactctcattacgtgctctcgctctctctcaaacagctacgtggg
gtttctaccttcatgcaagaaatgctggagactgctgcaattctgaaaggagctactgac
aagtcactaataatcattgatgagttgggccggggaacatcaacatatgatggattcggt
ttggcttgggccatctgcgagcaccttgttgaagtcattaaagcacctactttgtttgca
acccattttcatgaactcactgcattagctcatgaaaatgccgaccatgagacttcaaag
aaaattgttggtgtggcaaattatcatgtcagtgcacacattgactcatcaagtcacaag
ctgactatgctttacaaggttgagccaggcgcttgtgatcaaagttttggtattcacgtt
gctgaatttgcgaactttcctgaaagtgtggtcagccttgctagagaaaaggctgcagag
ttggaagatttctcacctatcactatcattgcaaatgatactaaacaagatgtgggatct
aaacggaagagagagtgtgaccctgacgatatgtctagaggtgctgcccgggctcgtcaa
ttcttgaaggaattctctgaattgccactagacaagatgaacgtgaaggaggctttggat
caagtacataaattgaagtacgacatggagaaggatgctgtgaactctctctggcttcag
caatttctctag

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