Camellia sinensis (tea plant): 114263795
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Entry
114263795 CDS
T07364
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114263795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114263795
03012 Translation factors [BR:
csin03012
]
114263795
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114263795
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114263795
Translation factors [BR:
csin03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114263795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
Dicer_dimer
nSTAND3
ATPase
AAA_11
T2SSE
PhoH
Myosin_head
Motif
Other DBs
NCBI-GeneID:
114263795
NCBI-ProteinID:
XP_028060184
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MKDRSPPSSYGAVYVPPHRLRSVITTPASSNHSSSASVVDSKTVSTNSFANPRANPYPYL
PHNQYQHNQQHQQQQRKKNYQFVFDDDFCEAGSDRDIEPSSNPGTSISDDVGGWRWKLTT
FLRSKDKQELVSREKKDRHDFEQIAALASKMGLYSHLYIKVVVVSKVPLPNYRFDLDDKR
PQREVILPPGLQRRVDCYLGEYLSQKSRSMEGFWDISRSNSSCSIATDEGLFEQPEPLPQ
SKAAMENIIWKRSLQMRSQQQVWQESSEGRKLLEFRRSLPAYKEKEALLMAISQNQVVIV
SGETGCGKTTQIPQFILESEIESVHGAQCSIICTQPRRISAMSVSERVATERGEKLGEMI
GYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRNLKGITHVIVDEIHERGMNEDFLLIVLK
DLLPRRPELRLILMSATLDAELFSSYFGGAPTVHIPGFTYPVQTHFLENILEMTGYRLTP
YNQIDDYGQEKMWKMNKQAPRKRKSQIVSAVEEALRAADLKDFSPDTQDSLSCWNPDCIG
FNLIEYLLCNICEKEKPGAVLVFMTGWDDISSLKDKLLAHPILGDSGRVLLLACHGSMAS
EEQRLIFDEPEDGVRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSW
ISKVSAQQRRGRAGRVRPGECYHLYPKCVYDAFADYQLPEILRTPLQSLCLQIKSLKLGS
ISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLTVLGRYMTMLPMDPKLGKMLILGA
VFNCLDPVLTVVTGLSVRDPFLTPMDKKDLAEAAKAQFSRDYSDHLALVRAYEGWKEAER
DLAGYEYCWKNFLSAQSMKAIDALRREFYSSLKDTGLVDSNNATCNAWSYDEHLIRAVIC
YGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSINARESKIPYPWLVFNEKIKVNSVFLR
DSTAVSDSVLLLFGGSISRGDTDGHLKMLGGYLEFFMKPALAEMYQSLRRELDDLIQNKL
VNPRLEIHTHHELMSAVRLLISDDRCDGKFVFNRQLIEPSKLSITAAPPALVSRTESGPG
GDNSKSQLQTLLTRAGYAAPTYKTKQLSNGQFQATVEFNGMQIMGRSCNNKKQAEKDAAA
EALEKLMARTRRGHDYIEQMSILLKKSKRDHN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccggtcgccaccgtcatcgtacggcgccgtctacgttcctccccaccgcctc
cgctccgtcatcactacccctgcttcgtccaatcactcttcctctgcttccgtcgtcgac
tccaagactgtcagcaccaacagcttcgcaaaccctagagccaatccctacccttacttg
ccccacaatcagtatcaacacaatcaacagcaccaacagcagcagcgaaagaagaattat
cagttcgttttcgacgatgatttttgcgaggcaggttccgatcgtgacatcgagccttcg
tccaatccaggcacttctatctctgatgacgttggcgggtggagatggaagttgactaca
tttttacgtagcaaggataaacaagaattggtgtctagggagaaaaaggatagacatgat
tttgagcaaatagcggctttggcaagcaaaatgggtttgtatagccatttatacataaaa
gttgtcgttgttagtaaggtcccactgccaaactatagatttgatctggatgataagcgg
ccacagagagaggtgatcttacctcctggtttacaaaggagagtggattgttatcttgga
gaatacctttctcaaaagtcaaggagtatggaaggtttttgggatatttcaagatcaaac
agtagctgtagcattgccactgacgaggggctttttgagcaaccagagccactgccacag
agtaaggctgccatggagaacatcatttggaaaagaagtttgcaaatgcgcagtcagcaa
caagtttggcaggaatcttcagaaggtagaaagctgctggaatttcgtaggagtcttcct
gcttataaagagaaggaggctttattaatggccatttcacagaatcaggttgttatcgtc
tcaggtgaaactgggtgtgggaaaaccactcagattccccaattcattttagaatctgag
attgaatctgttcatggagcacaatgtagcattatctgtactcagcctcgacgaatatct
gctatgtctgtttctgaaagggttgccacagagaggggagagaaattgggtgagatgatt
ggttataaagttcggctggagggtatgaaagggagggacacccacctactcttttgcacc
actggcatcttgttgagaagattactggtagatagaaatttgaagggtataacccatgtt
attgtcgatgagattcatgaacgtggaatgaatgaagattttctacttattgtactgaaa
gatcttctgcctcggcggcctgaactgaggctgattttgatgagtgcaaccttagatgca
gagcttttctcttcctactttggtggggctccgactgttcacattccgggctttacctac
cctgttcaaactcatttcctggaaaatattctcgaaatgacggggtaccgattgacccca
tacaatcaaatagatgattacggtcaggaaaagatgtggaaaatgaacaaacaagctcca
agaaagaggaagagccaaattgtttctgctgttgaggaagcactaagagctgctgattta
aaggatttttctccagacacacaagactctttgtcctgttggaatccagattgcattggt
tttaacctcatcgaatatcttctatgcaatatatgtgagaaagaaaagcctggagccgtt
ttagtttttatgacggggtgggatgatataagctctctgaaggataagctccttgctcat
cctatcttgggagattcaggccgagttttgttgcttgcgtgccatggttcaatggcgagt
gaagagcagaggttgatatttgacgagcccgaagatggagtgaggaaaatagtattagca
actaatattgccgagactagtataacaattaatgatgtcgtttttgttattgactgtgga
aaggcgaaagagacatcatatgatgcactgaataatactccttgtttgcttccttcctgg
atatcaaaggtttctgctcaacaaagaagaggaagagctggccgtgttcgaccaggagag
tgctaccatctttatcccaaatgtgtatatgatgcttttgcagattatcagttgccagaa
attttgaggacacctttgcagtcactttgtctgcaaatcaaaagtttgaaacttggaagt
atatctgagttcctatctagggctttacagtcgccagaattactggcggttcaaaatgct
attgaatatttaaaaattattggggctttggatgagaatgaaaatttgactgttttaggt
cgctacatgacgatgcttccgatggaccccaaacttggaaagatgctaatacttggtgct
gtattcaattgcctggacccagtgttgactgtcgttaccggtcttagtgtccgagatcca
ttcttaacaccaatggacaagaaggatctagcagaagcagcaaaagcacaattttcacgt
gattacagtgatcaccttgctcttgtccgggcttatgagggctggaaagaagctgaaaga
gacctagctggatatgaatactgctggaagaattttctgtctgctcaatcaatgaaagct
attgatgctctgcgaagggagttctactcctcacttaaggatactggccttgttgatagc
aacaatgccacctgcaatgcatggagttatgatgagcatctcattcgagctgttatttgc
tatggcttgtatcctggaatttgctctgttgtgcacaatgaaaagtcattctcgttgaaa
acaatggaggatggtcaggtgctcttgtactcaaactccatcaatgctcgagaatctaag
attccgtacccatggctagttttcaatgaaaagatcaaagtgaactctgtttttcttcga
gattcaaccgctgtttctgattcggtgctgctcctatttggtggaagtatttcaaggggg
gatactgatggccacttaaaaatgttaggaggatacttggagttcttcatgaaaccagcc
ctagcagagatgtaccaaagcttaaggagagagcttgatgatttaattcagaacaaattg
gtgaatcccagattggagatacacacccatcatgaacttatgtcggcagtaaggcttcta
atctcagatgatcgatgtgatggcaaatttgtgttcaaccggcagctgatagagccctcg
aagctgtctattacagcagcacctccggcattggtttcaagaacagagagtggtcccggg
ggtgataattcgaagagccagctccaaacattgctcacacgggcaggctatgcggctccc
acctataagactaagcaactaagtaacggccagtttcaagccactgtggagttcaatgga
atgcagatcatggggcggtcttgcaacaacaagaagcaagcggaaaaagatgcagctgct
gaggctcttgaaaagcttatggctaggacgcgtagaggccatgattatattgaacaaatg
tcaatcttgctgaagaagagcaagagagatcataactaa
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