KEGG   Camellia sinensis (tea plant): 114265480
Entry
114265480         CDS       T07364                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:csin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    114265480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csin04131]
    114265480
   03029 Mitochondrial biogenesis [BR:csin03029]
    114265480
Membrane trafficking [BR:csin04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    114265480
 Others
  Specific organelles associated proteins
   Auto phagosome
    114265480
Mitochondrial biogenesis [BR:csin03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    114265480
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_WDR75_1st ATG16 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd ASA1 Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_HPS5 NBCH_WD40 WDR54 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_NOL10_N eIF2A Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_RIG_1st TRM82_WD Beta-prop_Vps41 KNTC1_N PEP5_VPS11_N PQQ_2 Small_EgtBD Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 114265480
NCBI-ProteinID: XP_028062102
LinkDB
Position
Unknown
AA seq 508 aa
MLQNEIAMDAIKHALKALRKRHLLEEAAHSPAFIALSKPLAAQGSEWKEKAENLEVELQQ
CYKAQSRLSAQLVVEVAESRASKALVQEKETLISNLQDELTKARDECTHLSALLEEKTKA
LELVISENQEIKAQLEEMIVRATTAEAENKTLIDRWMLQKMQDAERLNEVNALYEDMLDQ
LKASGIEQLARQQVDGVVRRSEGAEFYVESTIPTACKHKMPAHEGGCAAIFFEYNSGKLV
SGGQDRTIKMWDTNTGSLSRSLYGCLGSVLDLAVTHDNKSIIAASSSNNLYVWDVNSGRM
NHTLTGHTDKVCAVDVSKVSSRHVVSAAYDRTIKVWDLHKGYCVNTIIFHSNCNALCFSM
DGQTICSGHIDGNLRLWDIQTGKLLSEVAAHSLAITSISPSRNGNVILTSGRDNLHNLFD
IRSLEVCGTLRASGNRVASNWSRSCISPDDNYVAAGSADGSVYIWSVSKGNIVSTLKEHT
ASVLCCSWSGLGKPLASADKNGIICTWT
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgttgcaaaacgaaatcgccatggatgcaatcaagcacgctttgaaggctcttcggaag
cggcatttgctcgaagaggccgctcattctcctgctttcatcgctctttctaagcctctt
gctgctcagggctcagaatggaaagagaaggcagaaaatcttgaagtggaacttcagcaa
tgttacaaagctcaatctcgattatctgcgcagcttgtggtggaggtggctgagtccaga
gcttcaaaagctttagttcaagagaaagaaaccttaatttctaatctgcaagatgagctt
acaaaagcaagggatgaatgcactcatttgtcagcgcttttagaagaaaagactaaagct
ttagaattggtaataagtgagaaccaggagataaaagctcaacttgaggagatgattgtg
agagcaacaacagctgaggctgaaaataagacgttaattgaccgttggatgttacaaaaa
atgcaggatgctgaacgtctgaatgaggttaatgcactttatgaagatatgcttgatcag
ctcaaggcaagtggtatagaacaacttgcaaggcagcaagttgatggtgtggtccgccga
agtgaaggtgctgaattctatgtggagtctactattcccactgcatgcaagcacaagatg
ccagcacatgaaggtggttgtgctgctatattttttgaatacaattctggaaaattggtt
agtggaggacaggacagaactatcaaaatgtgggatacaaacactgggtcactgagtcgc
agtctttatggttgcctaggttctgttcttgatcttgccgttacccatgataacaaatcc
ataattgctgcaagcagttcaaacaatttatatgtgtgggatgtaaattctggtcggatg
aatcatactctgacaggccacacagataaagtttgtgctgtagatgtgagcaaagtttca
agccgccacgtagtaagtgcagcttatgatcgtactataaaagtttgggatctgcataaa
ggttactgtgtcaacactataattttccatagcaattgcaatgccctttgtttcagcatg
gatgggcagaccatttgttcaggtcacattgatgggaatcttcggttgtgggatattcag
acagggaagctcctcagtgaagttgctgcacattcacttgctattacttcaatctctcct
tctcgaaatggaaatgtaatattaactagtgggagagacaacttgcataatttgtttgat
atacggtctttagaagtttgtggcacattaagagcaagtggaaacagagtggcatcgaat
tggagccgatcatgcattagtccagacgacaattatgttgctgctggatctgctgatgga
tctgtctacatttggtcagtatcaaaaggcaatatagtgagcactctgaaggaacacacc
gcttctgttctatgttgttcgtggagtggtcttggaaaacctcttgcctctgctgacaag
aatggaattatttgtacgtggacatga

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