Camellia sinensis (tea plant): 114265856
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Entry
114265856 CDS
T07364
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csin01009
]
114265856
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csin04131
]
114265856
Protein phosphatases and associated proteins [BR:
csin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114265856
Membrane trafficking [BR:
csin04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
114265856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
114265856
NCBI-ProteinID:
XP_028062486
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MDSQPSQLGRLSKSISNSSSQSLASILNNPHGGDASWIGWWSSSTAVAPPEFAPLAGNKA
GSELKRSDFKPYLVSISEPYGRFEDIRSHSKKESLEDLESNGGQGEALVSCLREVPAMYF
KEDFALEDRATFHENLVLQEKLSQNLDVVELHLVKEISLRSNSFFEAQRQLEDLNLKIVE
GCGRIREFKEIIRLVDSNLVDSGRQIQELNGTRNDLLGLQQKLRLILYVNQALSALKLLV
ASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRNHLAASVDTINSILSAEFMRTSIHGV
RNMDAVILSKIKARASLPKNGEENEVKLDEEETSIFRDQILPLTIGLLRTEKLPSVLRIY
RDTLTAHMKTAIKTAVADILPVLLTQPLESDYAPGERIVDADGGSSLASKLRSLSSESFV
RLLEAIFCIVRAHLVRAAEVKKAIEWIICNLDIHYVTDSVSAIAHTSEEANDQTASPLSY
SSHRNTLKVPSLQAKENDVTSSSNISRNFRVDVLRENTEAVFAACDSAHGRWAKLLGVRA
LLHPRLRFQEFLRIYNITQEFISATEKIGGRLGYSIRGTLQSQAKGFVDFQHESQMAKIR
GVLDRETWVEVHVAEEFQAIVSSLFCSEPLITGHTDDAQAQSNNANNNERGNASTKTLKF
AGVHYHMVNCGLILLKMLSEYIDINNNLPALSSEVVHRVVEILKFFNTRTCQLVLGTGAL
QVAGLKSITSKHLALASQVISFMDGIIPEIRRILFMKVPETRKALLLSEIDRVALDYKIH
RDEIHTKLVQIMRERLFVHLRGLPQIVEGWNRPEDADSLPSQFARSLTKEVGYFQRVLSK
TLHEFDVHVILRQVVIIFHSQISEAFSRLDISTPEARNRLHRDVQHILACIRLLPCDDMR
SGTPNWGQLDELLVQRFGPEAGE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcagccttcccaattgggaaggttgtccaaatcaatctccaattctagtagc
caaagcttagcttccatcctcaacaaccctcacggcggcgacgcctcgtggatcgggtgg
tggtcctcgtccaccgccgtggctccccctgaattcgctccactggcggggaacaaagcc
ggttcagaactcaaacgatccgattttaaaccctacttggtttcgatctcggaaccctat
ggaagattcgaggacattcggagtcatagcaagaaagagagtttggaggatttggagagc
aatggaggtcaaggtgaagcattggtctcgtgtcttcgtgaagtaccagcaatgtatttc
aaagaggactttgctttggaagatagagccacgtttcatgagaatttggttttgcaagag
aagctttctcagaatttggatgtggttgaattacatttggtgaaggagatttcgctgagg
tcgaattcgtttttcgaggcacagagacaactggaagatttgaatttgaagattgtggaa
ggttgtggtaggattcgggaatttaaggagattataaggctcgtggattcaaatttggtg
gattcggggcgacaaattcaagagttgaatgggacaagaaatgatttattgggtttgcaa
cagaaattgaggcttatattgtatgtcaaccaagctctttcggctcttaaattgcttgtt
gcatctgcagattgtgctggagccttagatgtcactgatgatttgcagcatttgctggat
ggtgatgagctgactggtttacactgctttcgtcaccttcgaaatcatctagctgcttca
gtagatactataaacagcattctttcagcagaatttatgcgtacatctatacatggtgtt
cgcaatatggatgcggtaatattgtcaaaaataaaagcaagggcaagcctacccaaaaat
ggtgaagagaatgaagttaaattggatgaagaagaaacatccatttttcgagatcaaatt
ctacctcttacaattggattgctgagaacagaaaaactcccctctgtgttgagaatatac
cgcgatacactaactgctcatatgaaaactgctattaagactgcagttgctgatattctt
cctgttcttctaacccaacctttggagtcagattatgcaccaggagaacgaattgtggat
gcagatggaggctcatcgcttgctagcaaattaagaagcttgtcatctgaaagttttgtt
cgacttttggaggctattttctgtattgtacgggcacacttggttcgggctgccgaagta
aaaaaggccattgagtggattatttgcaaccttgatattcactatgttactgattctgtt
tctgctattgcacatacttctgaagaggctaatgaccaaactgcttcccctctgtcatat
tcttctcataggaatactctcaaggtgccttcgttgcaggcaaaggaaaatgatgtgact
agttcatcaaatatttcaagaaattttagagtggatgtattgcgggaaaatacagaagct
gtcttcgcagcttgtgattctgctcacggaagatgggcaaagcttcttggggtgcgtgct
ctacttcatcctaggttgagatttcaggagtttttacggatatataacatcacccaggag
ttcataagtgctacagagaagattggtggaaggttgggatacagcattcgggggacacta
caatcacaggccaagggctttgttgatttccagcatgaatcccaaatggcaaaaatcagg
ggagtgcttgaccgagaaacttgggttgaagtacacgtggctgaggaatttcaggccatc
gtcagttctctgttttgttctgagccattaattactgggcatacagatgacgctcaagct
cagagcaacaatgctaacaataatgaacgcgggaatgcttccactaaaacactcaagttc
gcaggtgttcattatcacatggtaaactgtggcttgattttgctgaagatgttgtcagag
tacattgatattaataataatttgccagcactgtcttcagaagttgtgcatcgtgttgtt
gaaatcttgaagtttttcaatacaaggacttgtcagcttgttcttggtactggtgccttg
caggtggctggtttgaaatccattacttctaagcacttggcattggcaagtcaggttatc
agttttatggatggtattattcctgaaatccggaggattctcttcatgaaagtacctgag
acacgaaaggcattgctactgtctgagattgatcgagtagctctggattataaaatccac
agagatgagatacatacaaaactggttcaaataatgagagaaaggttatttgttcatctt
cgtggtttaccacaaattgttgagggttggaacagaccagaagatgctgattcactgccc
agtcagtttgctcggtcccttacgaaggaagttggctattttcaacgtgtcttatccaaa
actctgcatgaatttgacgttcacgtaattttgaggcaagttgttataatcttccactca
caaatttctgaagcattttcccgcttagatattagcactccagaagcaagaaacaggctc
catcgggatgttcaacacattcttgcatgcattcgattgttgccttgtgatgatatgaga
tctggtaccccaaattgggggcaacttgatgaattattggtgcaaagatttggtcctgaa
gctggtgaataa
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