Camellia sinensis (tea plant): 114266771
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Entry
114266771 CDS
T07364
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114266771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114266771
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114266771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
114266771
NCBI-ProteinID:
XP_028063492
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MEVGSSQSQPQSTKQKADALQSLSGPFSSSIAKLSGSSRGIPPNKDFHFYYNFNEFNAPI
TEIADTSQLMLDTIGYSSHLWGKEMAFPDEFDDVYDWLVNVNDELFERFDVSADEFEKLR
KQEEERGSKLMSSVDSESGFQLVYGKKKGLNRLMEKDLSSSSSSSAVKVASRDRKTMGTK
QKIPFHIPTIPRPQDMFKIVVNNSNQPFDHVWLQRSEDGSRVIHPQEKFSALDFVDKNVV
EPVKPPPTESTSFKLVEEVKDLKELAAKLRGVNEFAVDLEHNHYRSFQGLTCLMQVSTRT
EDFVVDTLKLRIHIGPHLREVFKDPMKKKVMHGADHDIMWLQRDFGIYVCNMFDTGQASR
VLKLERNSLEYLLSHFCGVTANKEYQNADWRLRPLPDEMLRYAREDTHYLLHIYDLMRIR
LLSASTESEDSDEPLVEVYKRSYDLCMRLYEKELLTDSSYLYIYGLQGAGFNAQQLAIVA
ALCEWRDVVARAEDESTGYVLPNKTLLDIAKQKPVTTNMLRHLVKSKHPYVDRNLGSIVS
IIRHSMQNAAAFEAAAELLKEVRVETASEENTVSADGNETQLPESPARLTTTATESIGGG
ISINDSMTRNPPGSVHVKESLELGSRTAGICRNGQENSSHLGAQATVQVLKKPSRAFGAM
LGNSTAKRKFDSDKKEEEELKLGQIKSSVSLPFHSFVASAEQSQPVVKEPAKVSESMLHE
EPSSVKAKSSNSDDVILIGNDASMNHDEPSALHPSSSNLDDFILIEDDENVEEAITGEIK
NEQLEDREDKTLGSDPEMGEEDDETMSLCDLSSSFQECFKSTNQTSKPKQAEQSKESGGF
LQLKPFDYEAARKEFRFGEDRKAKKGEEGDEGHRNNSRLDKVDRKKSSVAGHSRNDERTG
DFAQGRRRQAFPATGNRSATFRSSRS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcggttcgtctcagtctcaaccccagtccacaaagcaaaaggccgatgcttta
caatctctctccggtcctttttcctcttcgatagcaaagctttcgggttcttctcgaggc
ataccacccaataaagattttcacttttattacaactttaacgagttcaatgccccgatt
acagaaattgccgatacatcgcaattaatgctcgatacaatcgggtattcatcgcattta
tggggcaaagaaatggcctttcctgatgaatttgatgatgtgtacgactggcttgtcaat
gtgaacgatgagttgtttgagaggtttgatgtgtctgcggatgagtttgagaagttgagg
aagcaagaagaggaaagagggtcgaaattgatgagttcggtggattcggaaagtgggttt
cagttggtttatgggaagaagaaagggttgaatcggttgatggagaaagatttgagttct
tcgtcgtcgtcttcggctgtgaaggtggcttctagggataggaaaacgatggggacgaag
caaaagattccatttcatatacccacaattccgcggcctcaggacatgtttaagatagtt
gttaataattcaaatcagccatttgatcatgtttggttgcagaggagtgaggatgggtct
agggttatacatccacaggagaaattttctgctttggattttgttgacaaaaatgttgtt
gagcctgtgaaaccacctccaactgagtctacttcattcaagcttgtggaagaagtcaaa
gatttgaaggagttagctgcaaaattacgtggtgtgaatgaatttgcggttgatttggaa
cataatcattatcgatcttttcaagggttgacttgtctgatgcaagtctcaactagaact
gaggattttgtcgttgatacgctaaagcttcgcattcatattggtcctcatctgagggaa
gttttcaaagatcctatgaagaaaaaggtcatgcatggagcggatcatgatataatgtgg
ctccaaagggactttggcatatatgtctgcaatatgttcgacactgggcaggcctcaaga
gtattgaaattggaaagaaatagtctggagtatcttctgtctcacttttgtggagttacc
gctaacaaagaataccagaatgcagattggagacttcgccctctacctgatgagatgctc
agatatgccagagaagacacacactacctgttgcatatttatgatttaatgagaatcagg
ttgctttctgcatcgactgagtctgaagattctgatgaaccgctggtggaggtctacaag
cgcagttatgatttatgcatgcggctttatgaaaaagaacttttgacagatagttcatat
ctctacatatatggtttgcagggcgctggtttcaatgcccagcagcttgcgattgttgca
gcactttgtgaatggagagatgttgttgcccgtgcagaggatgaaagtactggttatgta
ttgccaaacaaaactcttcttgatattgccaaacagaagcctgtcaccaccaacatgcta
cgccatttggtgaaatcaaagcacccatatgtagatcgcaatcttggttccattgtcagc
atcattaggcattcaatgcagaatgctgctgcatttgaagctgctgcagagcttctaaag
gaggttcgcgtggaaacggcatctgaagaaaacacggtgtctgcagatggaaatgaaacc
caacttcctgaatctcctgcaagattaaccacaacagcgacagaaagtataggtggtggc
atttcaataaatgatagcatgactagaaaccccccaggttctgtgcatgttaaggagtct
ttggaacttggaagccgaactgctggaatttgcagaaatggacaagaaaattcttcacat
ttaggtgctcaagcaactgttcaggtgctaaagaagccaagccgtgcttttggggcaatg
ctggggaattctacagcaaagaggaagtttgattccgataaaaaggaagaggaagagctc
aagttggggcagatcaaatcttcagtaagccttccatttcattcatttgtggccagtgca
gagcagtcacaaccagttgtaaaagagcctgctaaagtatcagaaagtatgcttcacgaa
gaaccttcttccgtcaaagccaaaagctctaactcggatgatgttatactgattggcaat
gacgcaagtatgaatcatgatgaaccttctgctcttcacccctcaagctctaatttggat
gattttatattgatagaagatgacgaaaatgttgaggaagcaataactggcgaaataaaa
aacgaacagttggaggacagggaagacaaaactctagggtctgatcctgaaatgggcgag
gaagatgatgagaccatgtctctctgcgatctatcctccagctttcaagagtgtttcaag
tcaacaaatcaaacaagtaaacccaagcaagcagagcagtccaaagaatctggtgggttt
ttgcagttgaaaccatttgattacgaagctgcaaggaaagagtttaggtttggggaagat
cggaaagcgaaaaagggggaagagggcgatgagggtcataggaataatagtagacttgat
aaagtggataggaaaaagagttcagttgctggtcattcccgtaatgatgaacgaactgga
gattttgcgcagggtagaaggcgccaggcttttccagcaaccgggaaccgaagtgcaact
tttcgtagcagcaggtcgtag
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