KEGG   Camellia sinensis (tea plant): 114266771
Entry
114266771         CDS       T07364                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114266771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114266771
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     114266771
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 114266771
NCBI-ProteinID: XP_028063492
LinkDB
Position
Unknown
AA seq 926 aa
MEVGSSQSQPQSTKQKADALQSLSGPFSSSIAKLSGSSRGIPPNKDFHFYYNFNEFNAPI
TEIADTSQLMLDTIGYSSHLWGKEMAFPDEFDDVYDWLVNVNDELFERFDVSADEFEKLR
KQEEERGSKLMSSVDSESGFQLVYGKKKGLNRLMEKDLSSSSSSSAVKVASRDRKTMGTK
QKIPFHIPTIPRPQDMFKIVVNNSNQPFDHVWLQRSEDGSRVIHPQEKFSALDFVDKNVV
EPVKPPPTESTSFKLVEEVKDLKELAAKLRGVNEFAVDLEHNHYRSFQGLTCLMQVSTRT
EDFVVDTLKLRIHIGPHLREVFKDPMKKKVMHGADHDIMWLQRDFGIYVCNMFDTGQASR
VLKLERNSLEYLLSHFCGVTANKEYQNADWRLRPLPDEMLRYAREDTHYLLHIYDLMRIR
LLSASTESEDSDEPLVEVYKRSYDLCMRLYEKELLTDSSYLYIYGLQGAGFNAQQLAIVA
ALCEWRDVVARAEDESTGYVLPNKTLLDIAKQKPVTTNMLRHLVKSKHPYVDRNLGSIVS
IIRHSMQNAAAFEAAAELLKEVRVETASEENTVSADGNETQLPESPARLTTTATESIGGG
ISINDSMTRNPPGSVHVKESLELGSRTAGICRNGQENSSHLGAQATVQVLKKPSRAFGAM
LGNSTAKRKFDSDKKEEEELKLGQIKSSVSLPFHSFVASAEQSQPVVKEPAKVSESMLHE
EPSSVKAKSSNSDDVILIGNDASMNHDEPSALHPSSSNLDDFILIEDDENVEEAITGEIK
NEQLEDREDKTLGSDPEMGEEDDETMSLCDLSSSFQECFKSTNQTSKPKQAEQSKESGGF
LQLKPFDYEAARKEFRFGEDRKAKKGEEGDEGHRNNSRLDKVDRKKSSVAGHSRNDERTG
DFAQGRRRQAFPATGNRSATFRSSRS
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggaggtcggttcgtctcagtctcaaccccagtccacaaagcaaaaggccgatgcttta
caatctctctccggtcctttttcctcttcgatagcaaagctttcgggttcttctcgaggc
ataccacccaataaagattttcacttttattacaactttaacgagttcaatgccccgatt
acagaaattgccgatacatcgcaattaatgctcgatacaatcgggtattcatcgcattta
tggggcaaagaaatggcctttcctgatgaatttgatgatgtgtacgactggcttgtcaat
gtgaacgatgagttgtttgagaggtttgatgtgtctgcggatgagtttgagaagttgagg
aagcaagaagaggaaagagggtcgaaattgatgagttcggtggattcggaaagtgggttt
cagttggtttatgggaagaagaaagggttgaatcggttgatggagaaagatttgagttct
tcgtcgtcgtcttcggctgtgaaggtggcttctagggataggaaaacgatggggacgaag
caaaagattccatttcatatacccacaattccgcggcctcaggacatgtttaagatagtt
gttaataattcaaatcagccatttgatcatgtttggttgcagaggagtgaggatgggtct
agggttatacatccacaggagaaattttctgctttggattttgttgacaaaaatgttgtt
gagcctgtgaaaccacctccaactgagtctacttcattcaagcttgtggaagaagtcaaa
gatttgaaggagttagctgcaaaattacgtggtgtgaatgaatttgcggttgatttggaa
cataatcattatcgatcttttcaagggttgacttgtctgatgcaagtctcaactagaact
gaggattttgtcgttgatacgctaaagcttcgcattcatattggtcctcatctgagggaa
gttttcaaagatcctatgaagaaaaaggtcatgcatggagcggatcatgatataatgtgg
ctccaaagggactttggcatatatgtctgcaatatgttcgacactgggcaggcctcaaga
gtattgaaattggaaagaaatagtctggagtatcttctgtctcacttttgtggagttacc
gctaacaaagaataccagaatgcagattggagacttcgccctctacctgatgagatgctc
agatatgccagagaagacacacactacctgttgcatatttatgatttaatgagaatcagg
ttgctttctgcatcgactgagtctgaagattctgatgaaccgctggtggaggtctacaag
cgcagttatgatttatgcatgcggctttatgaaaaagaacttttgacagatagttcatat
ctctacatatatggtttgcagggcgctggtttcaatgcccagcagcttgcgattgttgca
gcactttgtgaatggagagatgttgttgcccgtgcagaggatgaaagtactggttatgta
ttgccaaacaaaactcttcttgatattgccaaacagaagcctgtcaccaccaacatgcta
cgccatttggtgaaatcaaagcacccatatgtagatcgcaatcttggttccattgtcagc
atcattaggcattcaatgcagaatgctgctgcatttgaagctgctgcagagcttctaaag
gaggttcgcgtggaaacggcatctgaagaaaacacggtgtctgcagatggaaatgaaacc
caacttcctgaatctcctgcaagattaaccacaacagcgacagaaagtataggtggtggc
atttcaataaatgatagcatgactagaaaccccccaggttctgtgcatgttaaggagtct
ttggaacttggaagccgaactgctggaatttgcagaaatggacaagaaaattcttcacat
ttaggtgctcaagcaactgttcaggtgctaaagaagccaagccgtgcttttggggcaatg
ctggggaattctacagcaaagaggaagtttgattccgataaaaaggaagaggaagagctc
aagttggggcagatcaaatcttcagtaagccttccatttcattcatttgtggccagtgca
gagcagtcacaaccagttgtaaaagagcctgctaaagtatcagaaagtatgcttcacgaa
gaaccttcttccgtcaaagccaaaagctctaactcggatgatgttatactgattggcaat
gacgcaagtatgaatcatgatgaaccttctgctcttcacccctcaagctctaatttggat
gattttatattgatagaagatgacgaaaatgttgaggaagcaataactggcgaaataaaa
aacgaacagttggaggacagggaagacaaaactctagggtctgatcctgaaatgggcgag
gaagatgatgagaccatgtctctctgcgatctatcctccagctttcaagagtgtttcaag
tcaacaaatcaaacaagtaaacccaagcaagcagagcagtccaaagaatctggtgggttt
ttgcagttgaaaccatttgattacgaagctgcaaggaaagagtttaggtttggggaagat
cggaaagcgaaaaagggggaagagggcgatgagggtcataggaataatagtagacttgat
aaagtggataggaaaaagagttcagttgctggtcattcccgtaatgatgaacgaactgga
gattttgcgcagggtagaaggcgccaggcttttccagcaaccgggaaccgaagtgcaact
tttcgtagcagcaggtcgtag

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