Camellia sinensis (tea plant): 114267341
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Entry
114267341 CDS
T07364
Name
(RefSeq) histone deacetylase 19 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
csin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114267341
03083 Polycomb repressive complex
114267341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114267341
Enzymes [BR:
csin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114267341
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114267341
HDAC complexes
Sin3A-HDAC complex
114267341
BRAF-HDAC complex
114267341
REST complex
114267341
SHIP complex
114267341
MiDAC complex
114267341
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114267341
Heterochromatin formation proteins
Other heterochromatin formation proteins
114267341
Chromatin remodeling factors
NuRD complex
114267341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114267341
NCBI-ProteinID:
XP_028064181
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MMDAGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVLKPFPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHSLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDG
IDDESYHFLFKPIIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGLEVDDKMPQHEYYEYFGPDYTLHVAPSNME
NKNSRPLLEEIRANLLDNLSKLQHAPSVQFQERPPDTELPEADEDEDDGDERWDPDSEME
IDAECKPLPSRVKREIVELEPKDMVDQKIIEEQARGINTTQEPTAILKAPDSRSRLIDES
CLKVEQENMKKPCDARAQM
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcgggaggcaattctcttccatccggacctgatggtgtgaagaggaaaatt
tcttacttttatgacccagaggttggcaattactactatggtcagggtcaccctatgaag
ccacataggatccgaatgacccatgctcttcttgcccactatggattgttgcaacacatg
caggtcctaaagcccttccctgcacgggatagagatctttgccgctttcatgctgatgat
tatgtgtcctttttgaggggtataacccccgagacacagcaagatcagctaaggcaactc
aagcgattcaatgttggtgaagactgccctgtcttcgatggtctttactctttctgtcaa
acttatgctggtggatcagttggtggcgcagttaagttaaatcatagtctctgtgatatt
gccattaattgggctggtggactacatcatgctaagaagtgtgaggcatctggattttgc
tatgtaaatgacattgtcttggcaatcttagaacttcttaaacaacatgagcgtgttttg
tatgtggacattgacattcaccacggggacggtgttgaggaggctttttacaccactgac
agggtcatgactgtgtcattccataagtttggagattattttcctggtactggggatgta
cgtgatataggatatgggaaagggaaatactactcccttaacgtaccattggatgatggg
attgacgatgagagctaccacttcttgttcaaaccaatcattggtaaagtgatggaagtt
tttaagcccggtgcggtggttctccaatgtggtgctgattccttatctggggaccggtta
ggatgcttcaatctttcaataaaaggccatgcagagtgtgtcaggtatatgagatctttc
aatgtgccactattgttgctgggtggtggtggttacaccatcaggaatgttgctcgttgt
tggtgttacgagacaggagttgccctgggtcttgaagtcgacgataagatgccacaacat
gagtattatgagtattttggtccagactatactcttcatgttgcccccagtaacatggag
aacaaaaattcacgaccgttactggaggagataagggctaatcttcttgataatctttcg
aagcttcaacatgctcccagtgtccaatttcaggaaagaccacctgatactgagcttcct
gaggcagatgaagatgaagatgatggagatgaaagatgggatccggattctgagatggaa
attgatgcggagtgtaaacctctaccaagcagagtgaagagagaaattgttgaattggag
cctaaagatatggtggatcaaaaaataattgaggagcaagctagaggcatcaacactaca
caggagccaactgcaatcttaaaggctccagacagcagatctaggctaatagatgaatca
tgtttgaaagttgaacaagaaaacatgaagaagccatgtgatgcacgagctcaaatgtaa
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