KEGG   Camellia sinensis (tea plant): 114268456
Entry
114268456         CDS       T07364                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03082  ATP-dependent chromatin remodeling
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114268456
   03083 Polycomb repressive complex
    114268456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114268456
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     114268456
  Histone modification proteins
   HAT complexes
    HATB complex
     114268456
   HDAC complexes
    Sin3A-HDAC complex
     114268456
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     114268456
    PRC2.2
     114268456
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     114268456
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114268456
  Chromatin remodeling factors
   NuRD complex
    114268456
   NuRF complex
    114268456
   NuRF complex (fruit fly)
    114268456
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 eIF2A WD_LRWD1 Beta-prop_RIG_1st MIOS_WD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 114268456
NCBI-ProteinID: XP_028065439
LinkDB
Position
Unknown
AA seq 424 aa
MGKDEEEMRGEIEERVVNEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLQDADNDARHYDDDRSDFGGFGSANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTISAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPSAGKPIQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTAKL
FDLRKLSTALHTFNCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGDES
TKGS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggtaaggacgaggaggagatgaggggagagatagaggagagagtggtaaacgaggag
tacaagatctggaagaaaaacactccattcctctacgatttggtcatcactcatgctctc
gaatggccctccctcaccgtcgagtggcttcccgatcgccaagagcctccgggaaaggac
tactctgttcagaagatgattttagggactcacacctctgagaacgagcctaattacctc
atgctcgctcaggttcagcttcctctccaagatgccgacaacgatgccaggcattatgat
gacgatcgctccgattttggaggctttggttctgctaatggcaaggttcaaataatccag
caaataaatcatgatggagaagttaaccgggctcgttacatgccccaaaacccatttatt
attgccacaaagaccattagtgctgaagtttatgtttttgattatagcaaacatccatct
aagcctccactagatggcgcctgcagtcctgatttgaggttgaggggccatagtactgaa
ggatatggtttatcatggagtcagttcaagcagggccatttattgagtggttctgatgat
gctcaaatatgcctgtgggacatcaatgcaactccgaagaataaggcactagatgccatg
caaatatttaaggttcatgaaggtgttgtagaagacgtagcatggcatctgaggcacgaa
tatttatttggttcagttggggatgaccaatatctgcatatatgggatctccggactcca
tcagctggcaagccaatccaatctgtaattgctcatcaaagtgaggttaattgcttagct
ttcaatccctttaatgaatgggttgtggcaacggggtctacagataagactgcaaagtta
tttgatctgcgcaagctctctactgctctccacaccttcaactgtcacaaggaggaggtt
tttcaagttgggtggaatccaaagaatgagaccatattagcttcttgttgtcttgggagg
aggcttatggtgtgggatcttagcaggattgacgaagaacagacaccagaggatgctgaa
gatggcccacccgagttgcttttcattcatggtggtcatacaagtaaaatttcagatttc
tcatggaacccctgtgaggattgggttattgctagtgtggctgaagataacatacttcag
atctggcagatggcagagaacatctaccatgatgaagatgatctaccgggagatgaatct
acaaaaggttcctag

DBGET integrated database retrieval system