Camellia sinensis (tea plant): 114268647
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Entry
114268647 CDS
T07364
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114268647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114268647
03036 Chromosome and associated proteins [BR:
csin03036
]
114268647
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114268647
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114268647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
114268647
NCBI-ProteinID:
XP_028065642
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MFGSSNPFGQSSNSPFGSQSVFGQANNASSNPFVPKPFGSTTPLGSQTGGSIFGSTSTSI
FGATQSSSPLTSTPAFGASSAPAFGGSMSAFGASSSPSFGSSSVFGQKSAFGGFGSSTTQ
TSPFGSTFQQSQLAFGSSLFGSSTPFGAPSQPTSGVLCDKRIPTRLKGKRRAWRAWRQPM
SSSITPAFGASSSAPSAFSQSTSPFGAPATTPTFGSSGFGQAAFGGQRGGSRLAAYTPTA
ELDSGSGTQPAGKLESISAMPAYKDKSHEELRWEDHQLGDKAFGQSSNSPFGSQSVFGQA
NNASSNPFTPKPFGSTTPLDSQTGGSIFGGTSSGVFGATQSSSPLTSTPTFGSSMPTFGA
SLTPAFGASSSSIGSSSVFGQKSAFGGFGSSTTQTSPFGSTFQQSQPAFGSSLFGSSTPF
GAPSQPTFGTSTTPAFGSTSTPSFGATSSPGFGATSAPAFGSTASPAFGSTGTAFGVSNA
PVFGSGGAFGASSTTVFGSSSTPAFGASSSPAFGTSSSPAFGASSTPAFGASSAPSFSFG
PNPAFSQSTSAFGSSPFATSPFGAQATTPTFGSSGFGQPAFGGQRGGSRVAAYTPTAELD
SGSGTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPAPAGQTTGAIGFSSSNTQS
NPFASSSAFGQSSANPFSSSTSSNPFAPKTPAFGSTGFGSSSTPVFGSSPFGASSTSNPF
GSTSSATTSIFGVSAAPAFGQSSSPSLFGSSGSSAFGSSTSIFGSASAPGTASAFGSGLS
FANTQSSPLFQSTTPSLGQTSSVFGQTASSFGQSAPTFGQSNFFNTPSTGFGGNLFSNTP
SLLSTSNPIGFGQTTPSLSTPFQSVPPAQTTGSFGFGNFGQTQAAGTSGFGGMPSIFGQS
TFGQSSVTQGSAVAQPLPVANPFGTLPAMPQMSIGRSGTAPSIQYGISSLPVVDKPAPVR
ISSLLTSRHLSQRRIRLPARKYHPKNDGPKVPFFTDDEETPSTPKADALFIPRENPRALV
IRPLEQWPPRTNVDKSSPLKDTSSPTHENGKISEAVSISLNGSSAEDKYSPVENGLVKEL
RGHPVKPNHKQPNGVHDDHPNQKGDSYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDY
YTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIRFIGETDVRRLDLESLIQFNNREV
IVYMDESKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGPKIDRYEEMLKRKAEDQGA
EFVSYDPVKGEWKFRVNHFSQYRLRDEDEDEDEDEHKNNY
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtcaagtaacccttttgggcagtcgtccaatagcccatttgggtcccaatca
gtttttggacaggctaataatgcaagcagcaatccatttgttcccaaacccttcggtagt
acaacccctttgggttcgcagacagggggttccatttttggcagcacttcaactagcatt
tttggtgcaacccaatcatcatcacctttgacttccacgccagcttttggtgcttcatcg
gctccagcttttggtggttccatgtctgcttttggagcttcatcatcaccatcatttggc
agttcttctgtttttggacaaaagtctgctttcggtggctttgggtctagtactacccaa
acaagtccttttggaagcacattccaacaatcacagctggcttttgggagcagcttattt
ggttcttctactccttttggcgcaccaagtcaacctacatctggggtactgtgcgataaa
cgaatacccactagactaaaagggaaacgcagggcttggagggcttggagacaacctatg
agctcttctattacgcctgcttttggtgcttcttctagtgcaccatcagcatttagccaa
tcaacttctccatttggagccccggctacaactccaacatttgggagctctggttttggg
caggctgcttttgggggtcaacgagggggaagcaggttggctgcttataccccaacagct
gagttagatagtggcagtggtacacagcctgctggaaagctggagtcaatatcggccatg
ccagcctacaaagacaaaagccatgaagaactgagatgggaagaccatcagttgggtgat
aaagcttttgggcagtcatccaatagcccatttgggtcccaatcagtttttggacaggct
aataatgcaagcagcaatccatttactccaaaacccttcggtagtacaacccctttggat
tcgcagacagggggttccatttttggtggcacttcaagtggcgtttttggtgcaacccaa
tcatcatcacctttgacttccacaccaacttttggtagttccatgcctacttttggagct
tcattaactcctgcttttggagcttcatcatcatcaattggcagttcttctgtttttgga
caaaagtctgctttcggtggctttgggtccagtactacccaaacaagtccttttggaagc
acattccaacaatcacagccggcgtttgggagcagcttatttggttcttctactcctttt
ggcgcaccaagtcaacctacatttggcacttctaccactccagcttttggttcaactagc
actccttcctttggtgccacaagctccccaggttttggtgctacaagcgcaccagccttt
ggttccacagcaagtccagcatttggtagcacgggtactgcatttggtgtctcaaatgcc
cctgtatttggatctgggggggcatttggggcttcaagcaccactgtatttggatcatca
agcaccccagcatttggcgcgtcaagcagtccagcatttggcacatcaagcagtccagca
tttggtgcttcaagtacacctgcttttggtgcttctagtgcaccatcctttagttttggt
cccaatccagcatttagccaatcaacttctgcatttggaagcagcccatttgctacttct
ccatttggagcccaggctacaactccaacatttgggagctctggttttgggcagcctgct
tttgggggtcaacgagggggaagtagggtggctgcttataccccaacagctgagttagat
agtggcagtggtacacagcctgctggaaagctggagtcaatatcagccatgccagtctac
aaagacaaaagccatgaagaactgagatgggaagactatcagttgggtgataaaggagga
cctgctcctgctggccagactactggtgcaattggatttagttcttctaacacacagtca
aatccttttgcttcttcatcggcatttggtcagtcatctgcgaatcccttttcatcgtcg
acatcttccaacccatttgctccgaaaactcctgcctttggtagtacaggctttggatcc
tcatctactcctgtctttggttcttcaccctttggtgcttcatccacttccaaccctttt
ggatcaacttcatctgcaacaacttccatatttggcgtatcagcagctcctgcatttgga
cagagttcctcaccatcactttttggttcatcaggctcctctgcttttggatcatcaaca
tctatatttggctctgcatcagctccaggaacagcatccgcgtttggatctggcttaagt
tttgctaacacacaatcatccccattattccagtcaactacgccttcacttggacagaca
agttcagtctttggacagactgcctcctccttcggacaaagtgccccaacctttggtcaa
tcaaatttttttaatacaccttctactggatttgggggcaacttgttctcaaacactcca
tcactgctatctacaagcaatcctattggatttggtcaaacaactccctcactttcaaca
cctttccagtctgttccacctgctcaaacaacaggttcttttgggtttggcaactttggt
caaacacaagcagctggtacaagtggttttggaggcatgccaagcatttttggtcagagt
acttttggacaatcgtccgttactcagggctctgcagttgcacaaccacttcctgttgca
aatccttttggaactctacctgcaatgcctcagatgtcaattggtcgttcagggactgca
ccttccattcaatatggaatttctagcctgccagttgttgacaaacctgctcctgttaga
atatcatctttgttgacttctcgccacctttctcaaaggcggattaggttgcctgcaagg
aaatatcatcctaaaaatgatggtccaaaggtgccatttttcactgatgatgaagaaact
ccgagcacacccaaggcagatgctcttttcattcccagggagaatcctagagctcttgtt
attcgccccttggaacagtggcctccaagaacaaatgtggataaatcatctccattgaag
gacacatctagtccaacacatgagaacggtaaaatatctgaagctgtttccatttctttg
aatggctctagtgcagaggataaatatagtccagttgaaaatggacttgtgaaggaactt
cgaggtcatcctgtcaaaccaaaccataaacaacccaatggagtccatgatgatcatcca
aaccagaaaggggactcttacattactctaactgggcacagagctggtgaggcagcaatt
gtgtatgagcatggggctgacattgaggcactgatgcctaagcttcgtcactctgactat
tacacagagcctcgaatccaagaactggctgccaaggaaagggctgaaccggggttctgc
cgtcgtgtaaaggactttgtagtgggacggcatggctatggtagcatcaggttcattggc
gagacagatgtgaggcgacttgatctcgagtcacttattcaatttaacaacagagaggtg
attgtttacatggatgagtccaagaaacctccggttggacaaggtctcaacaagcctgct
gaggtaacacttctcaacatcaaatgttttgacaagaagactgggcgtcagtatacagag
ggccccaaaattgatagatatgaggagatgctcaaaagaaaggccgaggatcaaggtgct
gagtttgtgtcctatgaccctgtcaaaggagaatggaagttcagagtcaaccatttcagc
cagtaccgccttcgagatgaagatgaagatgaagatgaagatgaacacaaaaataactac
tga
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