Camellia sinensis (tea plant): 114270080
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Entry
114270080 CDS
T07364
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin00040
Pentose and glucuronate interconversions
csin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114270080
Enzymes [BR:
csin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114270080
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VasX_N
Motif
Other DBs
NCBI-GeneID:
114270080
NCBI-ProteinID:
XP_028067278
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MLHTSCIFLICLLSSFSPLGTAMLNLTLPGQHPNPDSVVQDVQRRVNVSLSRRQMLSYTD
DDQSSNCMTGNPIDDCWRCNPNWHLNRQRLADCGIGFGQHALGGKGGRFYVVTDSSDHDA
VTPRPGTLRYAVIQDEPLWIVFSANMLIRLSQELIFNSYKTLDGRGANVHIIGGGCITLQ
YITNIIIHNIHIHHCYQSGEANVRSSPTHFGWRTMSDGDGISIFGARDIWIDHCSLSHCK
DGLIDAIMGSTAITISNNFFSHHNEVMLLGHSDEYLPDSGMQVTIAFNHFGKKLIQRMPR
CRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYIAPGNPFAKEVTKRVETDEEKWRE
WNWRSDGDVMVNGAYFVASGAGVEVKYEKAYSVEPKSASFIDQITMNAGVLGSRSNKLGK
WTAGNSGGGGDGMILESGTDEDNSDNTINSDAPPPPVAAPNSFLFSVLMALSSSLFLYVT
TTSVIL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacacaagctgcattttcttgatctgtctcctgagctcattttctccacttggc
actgcaatgctcaacctaactctgcctggtcagcacccaaaccctgattctgttgtccaa
gatgtccagagacgagtgaatgtatcactatcaagaagacaaatgctgtcctacactgac
gacgaccaatcaagcaattgcatgactggtaaccccattgacgattgctggcgttgcaac
cctaattggcatctcaaccgccaacgacttgccgactgtggcatcggttttggccagcac
gccctcggcggcaaaggcggccgattttacgtcgtcaccgactcctctgaccacgatgcc
gttactccccgccccggtaccctccggtatgccgtcatccaagatgaacccttatggatt
gtcttctccgctaacatgcttattcgcctatctcaggaactcatcttcaactcctacaaa
accctagatggccgcggcgccaatgtccacatcatcggcggcggatgcatcaccctccaa
tacatcaccaacatcatcatccacaacatccacatccaccattgctaccaatctggcgaa
gccaacgtccgctcaagccccacgcacttcgggtggagaaccatgtcggacggggatgga
atttccattttcggggcacgagacatatggatcgatcactgctcgctctcacactgcaag
gacggcctgattgatgccataatggggtcaacagcgatcacgatatcgaacaattttttc
tcacaccataacgaggtgatgttgttggggcacagcgacgagtacttgccggactcagga
atgcaggtgacgatagcgtttaatcatttcgggaagaagttgatacagaggatgccgagg
tgtagaagaggttatattcatgttgtcaacaatgattttacacgatgggagatgtatgcc
attggagggagtgggaatcctactattaatagccagggaaatcgatacattgctcctggc
aatccttttgctaaagaggtaacgaagagggtggagacagatgaggagaaatggagagaa
tggaattggaggagtgatggggatgttatggtcaatggtgcctactttgttgcctctggt
gctggtgttgaggtcaagtacgagaaggcctacagtgtcgagcccaagtctgcttccttc
atcgaccagatcaccatgaacgctggtgttctcggtagcaggagcaacaagctgggcaaa
tggactgcaggaaacagcggtggcggtggtgatgggatgattttagagtccggcactgat
gaagacaactctgacaatacgataaacagcgatgcaccgccgccgccagtggctgcccct
aattcctttctcttctctgttctaatggccttgtcatcctctctatttttgtatgtcacc
accacatctgtcatattgtaa
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