Camellia sinensis (tea plant): 114270741
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Entry
114270741 CDS
T07364
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114270741
09123 Folding, sorting and degradation
03018 RNA degradation
114270741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114270741
03041 Spliceosome [BR:
csin03041
]
114270741
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114270741
mRNA degradation factors
5'-3' decay
Lsm complex
114270741
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114270741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114270741
NCBI-ProteinID:
XP_028068118
LinkDB
All DBs
Position
Unknown
AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGPGGRPAKGVGRGIDD
GGAKGMGGGRGKGGSSSKPAGNRGGGRGRG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgctaccactttctcttctcaagactgcacaggggcatcctatgttggtggaacttaaa
aatggggaaacatacaatgggcatttggtgaattgtgatacttggatgaatatccatctt
cgtgaagtcatatgtacctcaaaggatggagataggttttggagaatgccagaatgctac
attcgggggaataccattaagtatcttcgagttccagatgaggtaattgataaagttcag
gaggagactaaaagtcgtgcagatagaaaaccacctggggtaggacgtggaaggggcaga
ggtagagaggatggtcctggcgggaggccggcaaaaggtgttgggcgtggcatagatgat
ggaggtgccaaaggcatgggtggaggccggggcaagggtgggtccagtagcaagcctgct
ggtaatagaggtggaggacgtggtcgtggctga
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integrated database retrieval system
