Camellia sinensis (tea plant): 114270823
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Entry
114270823 CDS
T07364
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
csin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114270823
03083 Polycomb repressive complex
114270823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114270823
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114270823
Histone modification proteins
HAT complexes
HATB complex
114270823
HDAC complexes
Sin3A-HDAC complex
114270823
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114270823
PRC2.2
114270823
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114270823
Heterochromatin formation proteins
Other heterochromatin formation proteins
114270823
Chromatin remodeling factors
NuRD complex
114270823
NuRF complex
114270823
NuRF complex (fruit fly)
114270823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_HPS5
WD40_RFWD3
MIOS_WD40
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
DUF6922
Motif
Other DBs
NCBI-GeneID:
114270823
NCBI-ProteinID:
XP_028068228
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MGEEGEAGIEQVEEEFTVWKKNTPLLYDLIVSHSLEWPSLTVHWLPSPPLPVSTDGLFAV
HKLILGTHTSDDFPNFLMVADAHLPLNPATAPATDPDHDSAIPKVEIIQKIYVDGEVNRA
RCMLQNPSLVAAKTSGSEVYVFDCSKHTMNEKGGSCEPDLRLMGHDKEGYGLSWSQFKEG
YLLSGSNDCKICLWDVSAMPQDKVLNATHVYEAHGSVVEDVAWHLKNENLFGSAGDDCCL
MIWDMRTNKPQHSVQVHEKEVNYLSFNPYNEWVLATASSDTTVGLFDMRKLTSPLHVLSS
HMEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNSLQIWQMAESIYHDDDDDEGKTSSSR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggagggagaggctgggattgagcaggtggaggaggagttcacggtatggaag
aagaacactccacttctctacgatctgatcgtttctcactcactcgaatggccatctctc
accgtccattggcttccatcgcctccgctacccgtctccacagatggattattcgctgta
cacaagctgattctagggacccatacatctgatgatttcccaaacttcctcatggtcgcc
gatgctcatctcccccttaatccggccacggcaccggcgactgatcccgaccacgactct
gcgattcccaaggttgagataatacaaaagatatatgttgacggagaagtgaatagggca
cgctgtatgcttcagaatccatctcttgttgcagcgaagactagtggatctgaagtgtat
gtatttgactgtagcaaacacacaatgaatgagaaggggggatcttgtgagcctgatttg
agattgatgggtcatgataaagaagggtatggtttgtcgtggagtcaatttaaggagggt
taccttttgagtggttcaaatgattgcaaaatatgtttgtgggatgtgtccgctatgcct
caagataaagtgctcaatgcaacacatgtttatgaggctcatggaagcgtggttgaggat
gtagcatggcacttgaagaatgaaaacttatttgggtctgcgggggatgattgttgtcta
atgatttgggacatgcgcacgaacaaaccccagcattctgtccaagttcatgagaaagag
gtgaactacctatcttttaatccatacaacgagtgggttctggctacagcttcttcagat
actacagttggtttgtttgatatgcggaagctgacatctccattgcatgttttgagtagt
cacatggaggaagtattccaggtggaatgggatcctaatcatgaaactgttttggcatcc
tctgctgatgacagaagattgatggtttgggaccttaacaggattggggatgagcagttg
gaaggagaagctgaagacggcccaccggagcttcttttttctcatggcggtcacaaagca
aagatatctgatttctcatggaacaagaatgaaccatgggttatttcgagtgttgctgaa
gacaattcgcttcaaatctggcaaatggccgaaagtatttatcacgatgatgatgatgat
gaaggcaaaacatcatcctctagataa
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