Camellia sinensis (tea plant): 114271403
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Entry
114271403 CDS
T07364
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114271403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114271403
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114271403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114271403
NCBI-ProteinID:
XP_028068823
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MKMGSANASSDLSSEVEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALGAVAS
ADGSALAKIGCTTMLAAIKMEIMTPTTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPV
VSKQLSDTISSSGMINLKELSLVNGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQ
IPVVSLNDDGRIVVFSEENGGKLEKEPVNKEKRKLKLSRIPFSLTCILHKNYILADPTAE
EESIMETLVTVVLDSSFQLVSLYKPGGPVLACTSAVQDCIALTRQRVKELQKILNEAISD
MEVD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgggttcggcgaatgcctccagtgatttgtcatcagaggtggaggtggatgct
tttagacgcctctttcctctacgctttcatgagcgtcatctacttgagtccatacgccct
gatgccaggccacttggaaaagctagagatacaacgcttgcgcttggagctgttgcatct
gctgatgggtcagcccttgccaagataggttgcactaccatgttggctgccattaagatg
gaaatcatgacccctaccacagagtcaccagatgagggctgcatagcaattgatttccat
atgcctccaatttgttctccaattgttagacctggcaggccagctgaggcagcaccagtt
gtgtcgaagcagttatctgacactatctcaagttctggcatgattaatttgaaggagtta
tccttggtgaatgggaaagctgcttggatggcctacctggacatatactgtttggatgct
gatggtgccctttttgatgctgcattactttcagcagttgctgccttctctcatttgcaa
atcccagtagtttctctgaatgatgatggaagaatagtagttttttctgaggaaaatgga
ggaaagttggaaaaggagccagtcaataaagagaagagaaagctcaagctgagtagaatc
ccattctccttaacatgcatacttcacaagaattacatcctggctgaccctacagcagag
gaagagtccatcatggaaactcttgtaactgtggtattggattcatcttttcaacttgta
tctctttacaagccgggtggaccagttctcgcatgtacatcagctgttcaggactgtatc
gcattaacaagacaaagagtgaaagaacttcagaaaattttgaatgaagccatttctgat
atggaggtggactag
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