KEGG   Camellia sinensis (tea plant): 114271709
Entry
114271709         CDS       T07364                                 
Name
(RefSeq) sm-like protein LSM8 isoform X1
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03018  RNA degradation
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114271709
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114271709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114271709
   03041 Spliceosome [BR:csin03041]
    114271709
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114271709
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114271709
Spliceosome [BR:csin03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    114271709
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 114271709
NCBI-ProteinID: XP_028069127
LinkDB
Position
Unknown
AA seq 98 aa
MSSGAGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDANLELSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcaagtggggctgggcttgaatcccttgtagatcaaacaatttctgtcattacaaat
gatgggcgcaatatagtgggagtgttaaaaggttttgaccaagctacaaatataattctt
gatgaatctcatgaacgcgtttactccaccaaggaaggtgttcagcaacttgtgttaggc
ctatacatcataagaggtgacaacataagcattgtgggggaacttgatgaagaactggat
gccaaccttgaattgtcaaaactaagagctcatcctctaaagcctgttatccattga

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