Camellia sinensis (tea plant): 114271872
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Entry
114271872 CDS
T07364
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04120
Ubiquitin mediated proteolysis
csin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114271872
04120 Ubiquitin mediated proteolysis
114271872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csin04121
]
114271872
Enzymes [BR:
csin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114271872
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114271872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_Vps41
zf-RING_5
zf-RING_16
Prok-RING_4
U-box_ZFPL1
zf-RING_11
DUF7373
zf-HC5HC2H
zf_RING_Vps8
zf-C3HC4_4
zf-RING-like
FAR1_N
Motif
Other DBs
NCBI-GeneID:
114271872
NCBI-ProteinID:
XP_028069323
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MMRLQTYAGLSLVATLVVIYHAFHRRGQFYPAMVHLSSSKISLVLLLNMGLVFMCVLWRF
TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTAVLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMGFLLFLDSLFLYNSVSYLIQTRQASVSLFFSFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFVNYG
VPLHLIRELYETFRNFKVRVNDYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKRLSCGHLFHVHCLRSWLERQHTCPTCRALVSPPENGTSTSGSRADAHQQGTGTASTP
SQNPTGDDVANNTISQHQTRLQAAAAAASIYERSFVYPSANTLVWSPGYALLPQAQRPLA
DTINTDSSGEQSSTSQSQQHPIAIPGGPANLPFPHSGFVNFLAPGTDVNYGERFGSNLNT
PDSQLEAQEKILQNQIKMLQSQLHLVQNSRAEKSMDTTVTASSDYKGKAVASSSSSCVLD
CRRHGESEETEKR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacttatgcggggcttagtctggtagccacactggtggttatttat
catgcgtttcacagaagagggcagttttaccctgcaatggttcatttatcgtcctccaag
atcagtctggtgcttcttctcaatatgggccttgtctttatgtgtgttttgtggcgattc
accaaacggcttttccttggatcactccgggaagccgaggtggagaggctgaatgagcag
tcatggagggaagtcatggaaatactctttgcaatcaccatcttccgccaggatttttcc
gtcacatttcttgctatggtcactgctgttttgttaattaaggctttgcattggttggct
caaaagagagttgagtacatcgaaacaaccccgtctgttcccatgttgtctcacatccga
attgtgtcttttatgggattccttctctttttagacagcctctttttgtacaactctgta
agctatttgatacaaacgcggcaggcttcggtttctctcttcttttcattcgagtatatg
atactggcaacaacaacagtgtcaacatttgtaaaatatgttttctacgtcagcgacatg
cttatggaaggacaatgggaaaaaaaggcagtctacaccttttacttggaacttatcagg
gacttgctgcacttgtctatgtatctgtgcttctttcttgtgattttcgtgaactatggt
gtgcctctgcacttgattcgggagctctatgagacatttcgtaactttaaggttcgggtt
aatgattacattcgttatcggaagatcacttcgaatatgaatgatcgttttccagatgca
acacctgaagagctcaatgcaagtgatgcaacctgcatcatttgtcgtgaggagatgact
accgccaagagactaagttgtggccatctgtttcatgtgcactgcctccggtcatggtta
gagcgacaacacacatgtcctacttgcagagcccttgtttcaccacctgaaaatgggact
agtacttctggatcacgggcagatgctcaccaacaaggaacaggcacagcaagtacacct
tctcagaatccaactggagatgatgtagcaaataacactatcagccagcatcagaccaga
ctccaagctgctgctgccgcggcctcaatatatgagagatcttttgtttatccttcagca
aatacattagtgtggtcccctggatatgctttacttccccaagcacagaggccactggca
gacactattaacacggactctagtggagaacaatcttcgactagtcaatcgcaacagcat
ccgattgcaatccctggtgggcctgccaacttgccctttcctcactctggttttgtcaat
tttcttgctcctggtacagatgtgaactatggagagagatttggcagcaatctaaataca
ccagactctcaattagaggcccaggaaaaaattcttcagaaccagattaagatgttgcaa
agccagctccaccttgtacaaaattcaagagctgagaaaagcatggacacaactgtgaca
gcatcttctgactacaaaggaaaggcagttgcatcatcatcttcatcgtgtgttttggat
tgtcgtcgacatggagagagtgaagaaacagagaagaggtaa
DBGET
integrated database retrieval system
