Camellia sinensis (tea plant): 114273179
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Entry
114273179 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114273179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114273179
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114273179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SPX
HDA2-3
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
114273179
NCBI-ProteinID:
XP_028070751
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MEEDDDELPSPSDPSDSSDEDNRYESESESESYDDEDNGNGNGNEDDEPSTVRRALPKDD
RKSQNVDALVRGNLIVKRQSLLPRVLSVTDRAAVVRKPFKPPCHNGYSDQNEQLIRRLWA
RKRFIPWGSTRPALVAITNRLNVPSAAEKEVLEEIVNLPPGVEPLVLWQPEECEEGAGDL
VLISVDPLLVRFLRPHQREGVQFMFECVSGLYSAANINGCILADDMGLGKTLQSITLLYT
LLRQGFEGKPMVKKAIIVTPTSLVSNWEAEINKWVGERVHLVALCESTRDDVVSGIDSFT
SPRSRLQVLIVSYETFRMHSSKFNHDGSCDLLICDEAHRLKNDQTLTNRALASLSCKRRI
LLSGTPMQNDLEEFYAMVNFTNPGILGDAAYFRRYFETPIICGREPSATEEEKRLCAERS
AELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFVHSKNVKRAITEEM
KQSKILAYITALKKLCNHPKLIYDTIKSGSPGTSGFEDCLRFFPPEMFSGRSGSWTGGEG
VWVELSGKMHVLARFLSQLCQRTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGTTSI
SKRQKLVNRFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR
DGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIXQEQTDKAKDQGNFLSTEDLRDLF
TFRENVRSEIHEKMSCIRCQNYDAVVDDMLDEVNEVDGARSTNEGCQSDQEDIGGFASIS
GCLHKLRSSEKQVGAPLEEDLGSWGHHFFATTVPDAIFQASAGEEVSFVYTNQIDGKLVP
VESMKSPKTQGVEGNKEESGSKKSLRQKSMFSSPQQSLPSVSSDVGFVQNMLPTSRTPIQ
RVNLKSARSSLKGTLHVVSKPKLSIGNQLPQKRLSPEPINDDDFQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgacgacgaactcccttcaccgtccgatcccagcgattcatctgacgaa
gataaccgatatgaatctgaatctgaatctgaatcttatgatgatgaggataatggtaat
ggtaatggtaatgaagatgatgaaccatcgactgtccgtcgagctctgccgaaggacgat
cgaaagtctcaaaatgtcgatgctcttgtgagaggcaaccttattgtgaaaagacagtcg
ctgcttccaagggtactttcagtgacggacagagcagctgttgttagaaaaccctttaag
cctccctgtcataatggatacagtgatcaaaatgaacagctcattcgtcgtctttgggct
cgtaagcggttcattccctggggatctacgaggcctgcgttggttgcaattaccaatagg
ttgaatgttccttctgctgctgagaaagaagtgttggaggagattgtgaatcttccacca
ggggttgaaccattggtcctgtggcaaccagaagaatgtgaagaaggagctggtgatttg
gtgctgatatcagtggatcctttgcttgtccgtttccttcggccccatcagagagagggg
gttcaattcatgtttgaatgcgtttcagggttatatagtgctgccaatataaatggatgc
attctggctgatgatatgggtttgggaaagactttgcagtcaatcacactattgtatact
cttcttcgtcagggatttgaggggaaaccaatggttaaaaaggctataattgtaactcct
accagtcttgtaagtaattgggaagctgaaattaataagtgggttggagaaagagttcat
cttgttgctttgtgtgaaagcactcgagatgatgttgtctccggaattgacagtttcaca
agtcctcgcagccgtttacaggtattgattgtttcatatgaaacatttcggatgcattca
tcaaaattcaaccatgatggatcttgtgatcttctcatatgtgatgaagctcaccgactg
aaaaatgatcagacattgacaaatagagcattagcttctctctcatgcaagcgtcgcatt
ctattgtcaggaactccaatgcagaatgacctagaagagttctatgcgatggttaacttt
actaatccaggaatattgggtgatgctgcatattttcgacggtactttgagacaccaatc
atctgtggaagagaaccatctgccactgaagaagagaagcggctatgtgctgagcgctca
gcagaactaagtgcaaaagtaaaccagtttatattgagaaggaccaacgcgttgttatca
aatcacttaccaccaaagataattgaagttgtttgttgcaagttgactcctctccaatca
gaattatataatcatttcgtacattcaaaaaatgttaaacgagcaattacagaagaaatg
aagcaatcaaagatcttggcttacattacagctcttaagaagctttgcaatcatccaaag
ctaatatatgatacgataaaaagtgggagtccaggaacatcaggatttgaggactgtttg
cgctttttccctccagaaatgttctctggaagatctggatcttggactggtggcgagggg
gtttgggttgaattatctggaaaaatgcatgtcttagcccggtttctgtcccagctgtgc
cagagaacagatgaccgaattgtcttggtctcaaactacacacagacactggaccttttt
gctcaattgtgtcgagagagaagatatccgttcctaaggcttgatggaactacatcaatc
agtaaaaggcaaaagttggtgaaccgctttaatgatccatctaaggatgagtttgtcttt
ctcctgagcagcaaggctggtggttgtggcctcaatttgataggtgggaatcgactggtc
ttatttgaccctgattggaatcctgccaatgacaaacaagctgctgcaagagtctggaga
gatggacaaaaaaagcgagtgtatatctatagatttttgagtactggaaccattgaagaa
aaggtgtaccagcgtcagatgtcaaaagaagggcttcaaaaagttatttagcaggaacaa
acagataaagctaaggaccaggggaactttctctcaacagaagatctacgggatctgttc
acatttcgtgagaatgtgagatctgaaattcatgaaaagatgagctgcatccgttgtcaa
aactatgatgcagtggtagatgacatgcttgatgaagtaaacgaggtagatggtgccaga
tcaacaaatgaaggttgtcaatctgatcaagaggatataggaggatttgctagcatttct
gggtgcttgcataagttacgaagctcagagaaacaggtaggagctcctctggaagaggat
ttaggtagttgggggcatcatttttttgcaacaacagtgcctgatgctattttccaagct
tcagctggagaggaggtctcgtttgtttacacaaaccaaatagatgggaaacttgtgccg
gttgaatcaatgaaaagcccaaagacccaaggagtagaaggaaataaggaagagtccggt
tcaaagaaaagcctgagacaaaaatccatgttttcatctccacaacagtcactgccgtca
gtttcttcagatgttggttttgtccagaacatgctacctacttctcgcacgcctattcag
agggtaaatttgaaatcagcgagaagttctctaaaaggtacattgcatgtagtatcaaag
cctaaactatctattggaaatcaattacctcaaaaaagattgtctccggaacctataaac
gatgatgattttcagtaa
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