Camellia sinensis (tea plant): 114273280
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Entry
114273280 CDS
T07364
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114273280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114273280
03041 Spliceosome [BR:
csin03041
]
114273280
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114273280
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114273280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
114273280
NCBI-ProteinID:
XP_028070843
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MKMKVKMELGIDCRNWDEDAYRNTILQDRQTQCRTVFRTSFPPSLSPNPPDLIVAASSDG
SLASYSISSLLSSPPLGLGFGNGRVQNLLQAEPQCFLQGHDGPAYDVKFYGNGEDSLLLS
CGDDGRIRGWRWKEISKPEEHIPWQGGHLKPVLDLVNPQHKGPWSALSPIPENNSIAVDN
QGGSIFAAAGDSCAYCWDVEKSEIKMVFKGHSDYLHCIVARNSGNQIITGSEDGTARIWD
CKSGKCIQVIDPGKDKKLKEFFPFVSCIALDASESWLACGNGRTLSVWNLPARECISRIS
THASIQDISFDDNQILAVGAEPLLTRYDMNGAILSRIQCAPQSAFSISVHPAGVTAVAGY
GGLVDVVSQFGSHLCTFRCRCQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaagtgaaaatggaattggggatagactgccggaactgggacgaagacgct
tacagaaacaccatattgcaggaccgccaaacccaatgccgaaccgtcttccgaacctcc
ttcccaccctctctctcccctaacccccccgacctcatcgtcgccgcctccagcgacggc
tccctcgcctcttactccatctcctctctcctctcctctcccccattgggtttaggtttt
ggtaatggtagggttcagaatttgttgcaggctgaacctcagtgctttcttcaagggcat
gatggacctgcttatgatgtcaaattttatggcaacggcgaagattctttgttgttgagc
tgtggtgatgatggccggattcgagggtggaggtggaaggaaatctcaaaaccagaggag
catattccttggcaaggaggccatttgaagccagtacttgacttggtgaatcctcaacat
aaagggccgtggagtgctctttctccgatcccagagaacaattccattgctgttgataat
cagggtggatccatttttgcggctgctggtgattcttgtgcgtattgctgggatgtggag
aaaagtgaaatcaaaatggttttcaaggggcactcagactacttgcattgtattgttgcc
cgtaattctggcaatcagattataactggatcagaagatgggacagcacgaatatgggat
tgcaaaagtggaaagtgtattcaagtaattgacccagggaaggataagaagttgaaagag
ttctttccatttgtcagttgcattgctcttgatgcaagtgagagctggttggcttgtggc
aatggccggactttgtctgtttggaatcttcctgctcgtgagtgcatttcgaggatatcc
actcatgcttctatccaagatatttcatttgatgataatcaaatattggcagttggagca
gaaccattactcactcgatatgatatgaatggggctattctttcacggatacaatgcgca
cctcaatcagcattttccatttctgttcatccagcgggtgttacagcagtggcgggttac
ggaggtctagtggatgttgtttcacaatttggaagccacttatgcacatttcggtgtaga
tgccagtaa
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integrated database retrieval system