KEGG   Camellia sinensis (tea plant): 114274694
Entry
114274694         CDS       T07364                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03013  Nucleocytoplasmic transport
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114274694
  09122 Translation
   03013 Nucleocytoplasmic transport
    114274694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114274694
   03041 Spliceosome [BR:csin03041]
    114274694
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114274694
Spliceosome [BR:csin03041]
 Complex C
  Other components
   EJC/TREX
    114274694
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114274694
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_IFT80_2nd DUF7099 Beta-prop_Nup120_160 CNH WD_LRWD1 Beta-prop_ACSF4 PROPPIN Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 114274694
NCBI-ProteinID: XP_028072474
LinkDB
Position
Unknown
AA seq 320 aa
MEETIPFKNLHSREYQGHKKKVHSVAWNCIGTKLASGSVDQTARIWHVEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGT
HIAVGNRDDELTILDVRKFKPIHKRKFGYEVNEIAWNTTGDMFFLTTGNGVNNSYAGTVE
VLAYPSLRPVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFTKLEW
PVRTISFNYTGEYIASASEDLFIDISNVQTGQSVHQIPCRAAMNSVEWNPKYNLLAYAGD
DKNKYQADEGVFRIFGFESA
NT seq 963 nt   +upstreamnt  +downstreamnt
atggaggaaaccatacctttcaaaaacctccacagcagagaatatcaaggtcacaagaag
aaggtgcattcggtggcttggaattgcattggaacgaagctcgcgtcaggttctgtcgat
caaacggctcggatttggcacgttgagcctcacggacatggcaaggttaaagatattgaa
ctgaagggacatactgatagtgtggatcagttatgttgggaccccaaacatgctgactta
atagcaactgcgtccggtgacaagacagttcgtctgtgggatgctcgtaatggaaaatgc
tcacagcaagctgaacttagcggcgaaaatattaacatcacctacaagcccgatggtaca
cacatagccgttgggaacagggatgatgaactaactatactggacgttcgaaaatttaag
cccattcataagcgcaaatttggttatgaggtaaatgagatcgcttggaacacgacagga
gatatgttctttttgaccactgggaatggtgtgaacaatagctatgcaggtactgtagaa
gtactggcatatccgtcccttcgaccggttgacacccttatggctcatacagctggttgc
tattgtattgcaattgatccattaggaagatatttcgctgttggaagtgctgattccttg
gtcagtctttgggatatcaaggagatgctttgtgtgcgaacattcacaaaactcgaatgg
ccggtgaggacaataagcttcaattacacaggagaatatattgcttctgccagtgaagac
ttattcattgatatatcaaatgtccaaactggtcaatcagttcatcaaataccatgtcgg
gctgccatgaatagcgtggaatggaatcccaaatacaatttgcttgcatatgctggagac
gacaaaaacaaatatcaggctgatgaaggtgttttcagaatatttggctttgagagtgct
tag

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