Camellia sinensis (tea plant): 114275215
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Entry
114275215 CDS
T07364
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114275215
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
114275215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
NBCH_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR54
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_BBS7
Beta-prop_SPT8
PEP5_VPS11_N
BCAS3_WD40
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
114275215
NCBI-ProteinID:
XP_028073016
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MEAELVIASSATDAGIGCWDLHSGAEHVRYRSCSSPSHGLVSVAGLFLASSQLRDPSSSS
GSVLYWSWNKPHVEVKCFPAEPINPLASNSDGTYIVGGGVSGEIYLWEVATGRLHKKWHA
HYRAVTCLVFADDQSLLISGAEDGSVRVWSLLMIFDDMRREQARHIYEYSFSEHTLRVTD
IASGYGGCNAIIVSASEDRTCKVWSLSKGKLLRSIVFPSIIDAIALDPGEHVFYAGGKDG
KIYIASLNSQGTSNNSYGMHIIGSLADHSKAVTCLAFAADGVLLVSGYEDGMVRVWDTKT
HNIIRVLKHAKGPVNNILVVRPPLCLNPQMLLNSQSSSVRRHGSSLPPPLEKYTNSTDEI
VEVKAFLSTQPTSNEPLHASYISIHTMNNQIKELQQHGSSAAAGMEMERLKYDCKRSMQM
AEWWKTMYENVHQFCVNELLDGDQTEGCNGNST
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaactggtgatcgcttcgtcggcgaccgacgctggcatcggttgctgggac
ttgcattccggcgccgagcacgtccgctaccgctcctgctcctccccttctcacggcctc
gtctccgtcgccggcctctttctcgcctcctctcagcttcgcgatccctcttcctcctcc
ggctccgtcctctactggtcctggaacaagcctcatgtagaagttaagtgcttcccagca
gaaccaattaacccgcttgcttctaatagtgacgggacttatatagttggaggaggtgtt
tctggggaaatatatttatgggaggttgcgactggtagactgcataagaagtggcatgct
cattatagagctgttacttgcttggtgtttgctgacgatcagtccctgttgatttctggg
gcagaggatggatctgttagagtctggtctcttctaatgatatttgatgatatgcggagg
gaacaagcaagacatatttatgagtatagtttctccgagcacactttacgggtgactgat
atcgcctcaggttatggaggatgtaatgcaattatagtgtccgcttctgaggatcggaca
tgcaaggtttggagcttatccaaggggaagctattgagaagtattgtgtttccatcaata
attgatgcaattgcattggaccctggtgagcatgtcttttatgctggaggaaaagatgga
aagatatacattgcttcactcaattctcaaggcacctccaacaacagttatgggatgcat
atcattggctcattagctgatcacagtaaagctgtcacttgcttagcatttgctgcggat
ggagtgttattggtttctggctacgaggatggcatggttcgagtctgggacactaaaact
cacaacatcattcgcgttttgaaacatgcaaaaggtcctgttaacaatattcttgttgtt
agaccaccactctgcttaaatcctcagatgttactgaattctcaatcttcttcagtaaga
aggcatggatcttcattaccacctccattggagaagtacacaaattcaacagatgaaatt
gtagaagttaaggcttttctcagtactcagcctacttccaatgaacctctgcatgcatca
tacatcagtatccacactatgaataatcaaatcaaagaactacagcaacatggttcatct
gcagctgctggaatggagatggaacgactaaagtacgattgcaaaaggtctatgcaaatg
gccgagtggtggaagacaatgtatgaaaacgtgcaccaattttgtgtaaatgagcttttg
gatggagatcaaacagaaggctgcaatggaaactccacctga
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