Camellia sinensis (tea plant): 114276309
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Entry
114276309 CDS
T07364
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114276309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csin04121
]
114276309
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114276309
BRITE hierarchy
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
114276309
NCBI-ProteinID:
XP_028073890
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAYSFPEEVLEHVFSFIQLDNDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVSPRIIIRR
FPEVRYVELKGKPHFADYNLVPEGWGGYVHPWIVAMARAYPLLEEIRLKRMVVTDETLEL
ISSSFSNFKILVLSSCEGFTTDGLAAIAANCRNLRELDLQECEVDDLSGHWLSHFPDTCT
SLVSLNIACLVSEVSFSALERLVARCPNLRSLRLNRAVPLERLPNLLRRAPQLIELGTGA
YSADLRSDVFSSLTEAFSGCKVLKGLSGFWDVVPTYIPAVYSICSGITSLNLSYANIQSP
DLAKLVSQCHNLQRLWVLDYIEDSGLGALAASCKDLHELRVFPSDPYVPEPNVSLTEQGL
VSVSEGCPKLESVLYFCRRMSNDALITIARNRRNLTRFRLCILEPHTADYLTREPLDAGF
GAIVEHCKGLRRLSVSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLK
KLEIRDCPFGDKALLDNAAKLQTMRSLWMSSCLVTYGACKLLGQKMPRLNVEVIDERGSP
DSRPENCPVEKLYIYRSTAGPRLDMPGFVWTMGANMLH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccagaggaggtgttagagcatgtattctccttcatacagctcgac
aacgaccgaaacgccgtctctttggtgtgcaagtcgtggtacgagattgaacgttggtgc
aggaggcggatcttcgttgggaactgctacgctgtgagccctaggatcattatcagacgg
ttcccagaggtcagatacgtggagctcaaagggaagccgcatttcgcggactataatctg
gtccctgagggttggggagggtatgtgcatccttggatcgttgccatggccagggcttac
cctttgttggaggagattcggctgaaacgcatggtcgttactgatgagactttggagttg
atatcgagttcgttcagcaactttaagatccttgttttgtcttcatgtgagggcttcact
actgatggattggccgccattgctgccaattgcagaaacctcagagagctggacttgcag
gagtgtgaagtggatgatctgagtgggcactggcttagccattttcctgatacctgcaca
tcattggtgtcccttaacattgcttgcttagtctctgaggtgagtttttctgctctggag
cgcctcgtggctaggtgtcccaacctgaggagtcttcgtctcaaccgtgctgtacccctt
gagaggctccctaatctactccgccgagcccctcagctgattgagttggggactggtgcc
tattcagctgatctccgatctgatgtcttttcaagcctaacagaagctttttcaggatgc
aaggttctcaaggggctatctgggttttgggatgtggttccaacctacattccagctgtc
tattctatctgctctgggataactagtctgaatttaagttatgccaatatccaaagccct
gatcttgcgaaacttgttagccagtgccataatttgcagcgtctatgggtactggattac
attgaagacagtggccttggtgcccttgctgcatcttgcaaggatctgcatgaactgagg
gtgtttccttctgatccatatgtcccagaaccaaatgtatccttgacagaacaaggcctt
gtctctgtttcagagggctgccctaagcttgagtcagtcctgtacttctgtcgccgaatg
tcaaatgatgcattaattaccattgctaggaaccgccgtaatctgactcgatttcgtctt
tgcatccttgagcctcatactgctgattacctaacccgggagccgttggatgctggtttt
ggagctattgttgagcactgtaagggattgcggcgcctatccgtatctggtcttctcact
gatcgtgtgtttgagtacattgggacccatgctaagaagctagagatgctatctattgcc
tttgcgggtgatagtgatttgggcctccatcacgtgctgtctggttgtgaaagcctgaag
aaactggagattagagattgcccctttggagacaaggctctcttggacaatgctgcgaag
ctgcagacaatgcgatccctttggatgtcctcttgcctagtaacttatggagcatgtaaa
ctgctaggtcagaagatgcctaggcttaacgttgaagttatcgatgagaggggatcccca
gattcaaggccggaaaattgccctgtcgagaagctttacatatataggtcaactgcgggg
ccaaggcttgacatgcctggttttgtgtggacaatgggtgctaacatgctgcattga
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