Camellia sinensis (tea plant): 114276546
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Entry
114276546 CDS
T07364
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114276546
03036 Chromosome and associated proteins [BR:
csin03036
]
114276546
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114276546
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114276546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
HTH_44
Spt6_S1
Tex_central_region
HHH_3
HHH_9
SH2
OB_PDCD11
S1_RRP5
S1
Motif
Other DBs
NCBI-GeneID:
114276546
NCBI-ProteinID:
XP_028074126
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MVGKSIISDDEDEVEVEEDERETGDGGGVDVDDRDDDDEEDEDEGQDEYEKDGFIVDDVD
EEEPDEEESERADSDEERQKKKKRKKRESEKNYVLDEDDYELLQDNNITGFHRPKFESKK
FKRLKKAQRDTDEERTGFSDEEEFDGSGKSGRTAEEKLKRSLFGDDEGPPLEDIAEEELP
EEEDGDIGEEDDEMADFIVDEEEVDEHGAPVRRRKPNKKKSRQAPGVSSSALQEAHDIFG
DVDELLRLRKQGLAKVGKYDDSSEWRERRLEDEFEPIILSEKYMTEKDDRIREIDLPERM
QISEESTGPPPTDEMSIEEESNWIYNQLLTGMIPLFSKRVTETTQGERELSINKDDIMRF
LEFMHVQKLDVPFIAMYRREDCLSLFRDPEQNEDDIENQSKPDQKPTMRWHKVLWAIQDL
DRKWLLLQKRKSALQSYYNKRFDEESRRIYDETRLALNQQLFESITKALKAAESEREVDD
VDSKFNLHFPAGEVGADEGQYKRPKRKSQYSICSKAGLWEVASKFGYSSEQFGLQISLEK
MRMDELEDAKETPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIFMDN
AVVSTSPTPDGNAAIDTFHQFAGVKWIRDKPLTRFEDAQWLLIQKAEEEKLLQVTIKLPD
TVLDKLVADSNDYYLSDGVSKSAQLWNEQRKMILQDAIFGFLLTSMEKEARSLLTSRAKN
WLLMDYGKLLWDKVSVAPYQRKESDANSDEEAAPRVMACCWGAGKPATTFVMLDSSGEVV
DTLDAGYLSVRSQNINDLQRKRNDQQRVVKFMTDHQPHVVVLGAVNLSCTRLKDDIYEII
FKMVEDNPRDVGHEMDGLSIVYGDESLPHLYENSRISLDQLSGHSGIVRRAVALGRYLQN
PLAMVATLCGPGREILSWKLSPLESFLTADDKYGMIDQVMVDVTNQVGLDVNLAIAHEWL
FAPLQFISGLGPRKAASLQRSLVRAGSIYTRKDLLTAHGLGKKVFVNAVGFLRIRRTGLA
ASSSQFIDLLDDTRIHPESYGLAQELAKDVYLEDVHDDANDDDDMLEMAIEHVREKPDLL
KYFDVDEYAKSKKRENKRETLDNIRLELIQGFQDWRRQYVEPSQDDEFYMISGETEDTLA
EGRIVQATVRRVQPQRAICGLESGLTGVLTKEDFSDDWRDNSDLSEKLHEGEILTCRIKS
IQKNRYQVFLTCRENEMRSNRYQNNRDLDPYYHEDQSSSQFEKEKARKEKELAKKHFKPR
MIVHPRFQNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGK
EHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKTMLSYRKFRNGTKAEVDEL
LKIEKSEYPMRIVYCFGISHEHPGTFILTFIRSTNPHHEYIGLYPKGFKFRKKMFEDIDR
LVAYFQRHIDDPQHDSGPSIRSVAAMVPMRSPATGGSSGGSFGSGGGWGGSGSNDGGWRG
QSMDRERTSTPGSRSGRGDYKNGGNRDGHPSGVPRPFGGRGRGRGGRGNNDRQDSDYSSQ
KWGAKDGGEGWSSFPGAKVQNSPGREAFPGGWGGGGSGGGGSSDGGGGGWGSSGGGGGGG
GGWGSDGGGGGGGSGWGQGDGGGGSGGDDADAGSSGWGGTKKSSAPQQSGGGGGWSGSSS
KGGGGGW
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggttggaaaatccataatctcagatgacgaagatgaggttgaagttgaggaggatgag
agagaaactggcgatggaggcggagtcgacgtcgatgaccgcgatgacgacgatgaagaa
gacgaggacgaagggcaagatgagtatgagaaagatgggtttattgttgatgatgttgat
gaagaagaaccagatgaggaagaatcggagagggcagacagcgatgaggagagacaaaag
aagaaaaaaagaaagaaaagagaatcggagaagaattatgttcttgatgaagatgactac
gagctccttcaggataataacatcacgggctttcatcgtccaaaatttgagagcaaaaag
ttcaagagactaaagaaagctcagagggacacagatgaagagcgcactggattttctgat
gaggaggagtttgatggaagtggaaagagcggacgaacagctgaggagaagctcaaaagg
agtttatttggtgatgatgagggaccacctcttgaggatattgctgaagaggaactacct
gaagaagaagatggcgacattggtgaagaggatgatgaaatggctgattttattgtggat
gaagaagaagttgatgaacatggggctcctgtgagacggaggaagccgaacaagaagaaa
tctaggcaggcacctggagtttcatcatctgcacttcaggaagctcatgacatatttggt
gatgttgatgaactcctgaggcttcgcaagcaaggcttagcaaaggttggcaaatatgat
gattctagtgaatggagggaaaggaggctggaagatgaattcgaaccaattattctttct
gagaagtatatgacagagaaggatgaccggatacgggagatagatttaccggaaagaatg
cagatctctgaggaaagcactggtccaccaccaacagatgaaatgagtatagaagaggag
agtaactggatatataatcagctcttgactggcatgatacctttatttagcaagagggtt
acagagacaactcaaggggagcgtgaactgtcaataaacaaggatgatattatgaggttt
ttggagtttatgcatgttcagaagttagacgttccatttattgccatgtaccggagggaa
gactgcctgagtctgtttagggacccagagcaaaatgaggatgatattgagaatcagagc
aaacctgatcaaaagcctacaatgcggtggcacaaggtgctgtgggccattcaggacttg
gacagaaagtggttgcttctccagaagcgaaagagtgctctccagtcatactacaataag
cggtttgatgaagagtcgcgtagaatttatgacgagacacgtctagctttgaatcagcag
ctttttgaatcaattacgaaggcactcaaggctgctgaatcagaaagagaggttgatgat
gttgactcaaagtttaacctgcacttccccgcaggtgaggttggtgcagatgaaggacaa
tataagaggcccaagagaaagtcacaatatagtatttgcagcaaggctggtctatgggag
gttgcgagcaagtttggctatagttctgagcaatttggattgcagatatctctggaaaag
atgagaatggatgaattggaggatgccaaggaaaccccggaggagatggcttcaaatttt
acatgtgcgatgtttgaaacacctcaagctgttttgaaaggtgccaggcacatggcagcg
gtagaaataagttgtgaaccatgcgtccggaagcatgtccgtagtatcttcatggataac
gctgttgtatcaactagtcccacacctgatggtaatgcagcaatagatactttccatcag
tttgcaggggtaaagtggatacgggacaagccactgaccagatttgaggatgcacaatgg
cttcttatccaaaaggctgaggaggagaagctgcttcaagtgaccattaagctgcctgat
actgtattagataagttagtagctgactctaatgattattatctcagtgatggagtgagt
aaatctgctcaattatggaatgagcagaggaagatgatactgcaagatgctatttttggt
tttctgctgacttcgatggagaaggaagcaagatccttgttgaccagtagagccaaaaat
tggttgcttatggactatgggaagctcttatgggacaaagtctctgtggctccatatcaa
cggaaggaaagtgatgccaactcagatgaagaagctgcaccgagggttatggcttgctgt
tggggtgctggaaaacctgcaaccacttttgtgatgttagattcttctggagaagtagtg
gatacactggatgctgggtatctcagtgtccggtctcaaaatattaatgacctgcagcgt
aagaggaatgatcagcaacgcgttgtgaagttcatgacagaccaccaaccgcatgttgta
gttctaggtgctgtgaacctgtcttgtactcggttgaaggatgatatctatgagatcatc
ttcaagatggtggaagataatccaagagatgtcggtcatgagatggatggtctaagcatt
gtatatggtgatgaatctcttcctcacctatatgaaaattctcgtatttcattagaccag
ctctccgggcactcaggtattgttaggcgggctgttgctcttgggcgttatctgcaaaat
ccacttgcaatggttgcgacactttgtggtcctgggagggagatattatcttggaaactt
agtcctttagagagctttcttactgctgatgataaatatgggatgattgatcaggttatg
gtggatgtcactaatcaagtgggccttgatgttaatttggctatagcccatgagtggtta
tttgctcctttgcaatttatttctgggcttggacctagaaaagctgcatctctacagagg
tctctagtaagagctggatcaatctacactcgtaaagatttgttgacagcccatggtctt
ggtaaaaaggtgtttgtcaatgcggttggtttcttgcgcatccggcggactggtttagct
gcaagcagcagtcagttcattgatttgttagatgatacaagaatacatccagaatcttat
ggtcttgcacaggaattggccaaagatgtttatcttgaagatgttcatgatgatgcaaat
gacgatgacgatatgcttgagatggcaatagagcatgtccgagagaaacctgatttatta
aaatattttgacgttgatgaatatgctaaatccaagaaacgggagaataagagagaaact
cttgacaatataagattggagttgatacagggctttcaggattggcgtagacagtacgta
gaacccagccaggatgatgaattttatatgatttctggggagacggaggatacacttgct
gaaggaagaattgtgcaagcaacggtacgcagagtgcaacctcaaagagcaatttgtggg
cttgaatctggattgactggtgtgcttactaaggaagacttttctgatgattggagggac
aattctgatttgtctgagaagttgcacgaaggtgagattcttacttgcaggatcaaatcg
attcaaaagaataggtaccaggttttcctaacttgtagagaaaatgagatgaggagtaac
cgttatcagaataatcgagacttggatccctactaccacgaagaccagagtagctcacag
tttgagaaagaaaaagctcgtaaagaaaaggagcttgctaagaagcatttcaaaccgagg
atgattgttcatcctcgttttcaaaatataacagcagatgaagcaatggagttcctgtct
gacaaggatccaggtgaaagtattgtccgccctagttctcgtgggccctcatttttgacc
ttaactctgaaagtttatgatggggtgtatgctcacaaagacatagttgaaggtggaaag
gaacacaaggacatcacaagcttgcttcgtattgggaaaacgttgaaaatcggagaggac
acatttgaggacttggatgaggtaatggaccgttatgttgatccattagtaactcatttg
aagacaatgttgagctaccgcaagttcaggaatggcactaaagcagaagttgatgagcta
ttaaaaattgagaaatccgaatatccaatgaggattgtttattgttttggcatatcccat
gaacatcctggcacatttattctgactttcatacggagcacaaacccacatcatgaatat
attggtttgtacccaaagggattcaagtttcgaaagaagatgtttgaggacattgatagg
cttgtagcatattttcagagacatattgatgatccacaacatgactcggggccctcaatc
cgatcggttgctgcaatggtgccaatgcgaagccctgcaactgggggctcatccggtgga
tcttttggtagtggtggtgggtggggtggttctggcagtaatgatggtggctggagaggt
cagtcaatggaccgagagagaacttctacaccaggttcacgatcagggagaggcgattac
aaaaatggtggcaatcgggatgggcatccaagtggggttccaaggccgtttggtggccgt
ggccgtggcagaggtggccgggggaataatgacaggcaggattcagattacagttctcaa
aaatggggtgccaaagatggtggtgaaggatggagcagttttccaggtgccaaagttcaa
aattcaccaggcagggaagcttttcctggcggttggggtggtggtggaagcggcggaggt
ggcagcagtgatggcggcggaggtggttggggcagtagtggcggcggtggcggtggcggt
ggcggttggggcagtgatggtggtggcggtggtggaggaagtggctgggggcaaggtgat
ggtggtggtggatcaggtggtgacgatgccgatgctgggagttctggctggggaggcacc
aagaaaagttctgccccacaacaatctggtggtggtggcggttggtctggaagcagtagt
aagggtggcggtggaggctggtga
DBGET
integrated database retrieval system
