Camellia sinensis (tea plant): 114276657
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Entry
114276657 CDS
T07364
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03030
DNA replication
csin03420
Nucleotide excision repair
csin03430
Mismatch repair
csin03440
Homologous recombination
csin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114276657
03420 Nucleotide excision repair
114276657
03430 Mismatch repair
114276657
03440 Homologous recombination
114276657
03460 Fanconi anemia pathway
114276657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csin03000
]
114276657
03032 DNA replication proteins [BR:
csin03032
]
114276657
03400 DNA repair and recombination proteins [BR:
csin03400
]
114276657
Transcription factors [BR:
csin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114276657
DNA replication proteins [BR:
csin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114276657
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114276657
MMR (mismatch excision repair)
114276657
DSBR (double strand breaks repair)
HR (homologous recombination)
114276657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
114276657
NCBI-ProteinID:
XP_028074263
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MPINLTPNAIPAINAGDVNSKPVVQVLDIKLIGNNQERYRFMLSDGVSTQHAMLATQLND
RVKSGRVLKGSVIQLIEYICSTVQNRKIIVVLNMETIISECEVIGNPKVFMESDSVGQKP
VPDDSFGRTTMATNNKSAQNAGNNMQSFHPTVQPPYQPPPNYKAHGSIMKNEAPARIIPI
AALNPYQGRWAIKARVTAKGEIHRYNNARGDGKVFSFDLLDSDGGEIRATCFNAVVDRFH
DIIEVGKVYLISKGSLKPTQKNFNHLKNEWEIFLEATSTIDLCPDEDGSIPQQQFSFRPI
SEIEVAENNSIIDIIGVVISVNPSVPILRKNGMETQRRILNLKDQSGRSVELTLWGDFCN
REGQNLQELVDCGLFPILAVKAGKVNDFSGKSIGTISSTQLFINPDSPEAQSLRVWFDQR
GKNIASQSISRDMTGGPKNEIRKTVSQIKDEGLGRSDKPDWVTVKASISFIKTDTFCYTA
CPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFEECDYRYLLQAQVQDHTGLTWVTSFQESG
EEIVGCSAKELYFLKYEEQDDVRFAEIIRGSLFREYLFRLKIKEEMYGDEQRVKITVVKA
DKVNYSAESRHLLDLILRVRPH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcaatttgactccgaacgcgattccggcaataaacgccggagatgtgaactcg
aagccggtggttcaggttctggacatcaaactcatcggtaacaatcaggaacggtaccgt
ttcatgctctccgatggtgtgtcgactcagcacgcaatgctcgctactcagctcaacgac
cgagtcaagtccggccgagtcctcaaaggttctgtcattcagttgatcgaatatatctgt
agtaccgttcagaatcgcaagatcattgttgttctaaacatggaaactattatatcagaa
tgtgaagtaattgggaatccaaaagtgttcatggaatctgattcagtaggacaaaaacca
gtgcctgatgacagctttgggcgcacaactatggctaccaataataagagtgcccaaaat
gctggaaacaatatgcagagttttcacccaactgttcaacctccataccaaccgcctcca
aattacaaagcccatgggtcaattatgaagaatgaagcaccagcacgaataattccaatt
gctgctttgaatccttatcaaggtcggtgggcaatcaaggcaagagtaactgcaaaagga
gagatccaccgttacaacaatgcccggggagatgggaaggtgttctcctttgaccttctt
gactctgatggaggtgaaatacgagccacctgcttcaatgctgttgttgatcgcttccat
gatattattgaggttggtaaagtctatttgatatcaaagggtagcttgaaacccacccag
aagaacttcaaccatctgaaaaatgaatgggagatatttttggaggcaacttcaacgatc
gatctttgccctgatgaagatggttctataccacaacagcaattctccttcagacctatc
agtgaaattgaggttgctgaaaataattcaatcatagacattattggtgttgtaatatct
gtgaacccttcagtccctatcttgaggaagaatggtatggaaactcagagaagaattcta
aatctgaaggaccaatccggccggagtgttgagttaactctatggggtgatttctgcaat
agggaaggtcaaaatctgcaagaactggttgactgtgggcttttcccgattttagctgtc
aaagctgggaaagttaacgacttcagtgggaaatctatagggaccatttcttccacccag
ctcttcataaatccagattctccagaggcccaaagcttgagagtttggtttgatcaacgg
ggcaaaaatattgcttctcaatctatctctagagacatgactggaggaccaaagaatgag
attcgtaaaactgtgtctcagatcaaggacgaaggcttgggaagatcagataagccagac
tgggttacagtgaaggcatccatatcattcatcaagacggatacgttctgctacacagct
tgcccattgatgattggagatagacagtgtaataaaaaagtgacaaggtcgggaaattca
agatggcaatgtgaccggtgcaatcaggaattcgaggagtgtgattacagataccttctt
caagctcaagttcaggatcatacggggttgacatgggtgacctcttttcaggaatcaggt
gaagagattgtgggttgctcagcaaaggagttgtacttcttgaaatatgaagagcaggat
gatgtcaggtttgcagaaatcatccgtggcagtctcttcagagaatatctgtttaggctc
aaaatcaaagaggaaatgtatggtgatgaacagagggtgaaaatcacagttgtcaaggca
gacaaggtgaactattctgctgaaagcagacacctgcttgatttgatcttgagagttcgc
cctcactga
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