Camellia sinensis (tea plant): 114276779
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Entry
114276779 CDS
T07364
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114276779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114276779
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114276779
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114276779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
114276779
NCBI-ProteinID:
XP_028074401
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MAVLSKPESVQIREVWNDNVEDEFALIRDIVDDYPYIAMDTEFPGTVLGPIPNSKNSVDY
YLCGLKANVDTLKLIQLGLTFSDDEGNLPTCGTDKYCVWQFNFCEFNLDEDIFADDSIEL
LRQSGIDFKKNNEKGIDARWFSELLMSSGIVLNDNVHWVTFHSDYDFGYLLKLLTGQNLP
DTQKEFLNLIRMYCPTLYDVKHLTRFCNNLHGGLNKVAEQLKVERIGISHQAGSDSLLTC
CTFMKLKEKYFNGSLEKYAGVLYGLGVENGHNMH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggttttgtcaaaacctgagtctgttcagattagggaagtttggaatgataatgtt
gaagatgagtttgctttgattcgtgatattgtagatgattacccgtatatagctatggat
acggagtttccgggcactgttcttggcccgatacccaattccaagaactctgttgactat
tatctttgtggcctgaaggccaatgttgatactttgaagttgattcagttgggtctgaca
ttttcggacgacgaagggaatcttcccacttgtgggactgataagtactgtgtttggcaa
ttcaatttttgcgaattcaatcttgacgaggatatctttgctgatgattcaattgagctt
ttacgccagagtggcattgattttaagaagaacaatgagaagggtatcgatgctcgttgg
ttcagtgagctcttgatgtcttcggggattgtgctgaatgataatgtgcattgggttacc
tttcacagtgattatgattttgggtacttgctcaagctacttactggccaaaatcttccc
gatacacaaaaggagttcctcaatttgatcagaatgtattgcccaaccctctacgatgtc
aagcatttgacgaggttttgcaacaatcttcatggtggattgaacaaggtcgctgaacag
ttgaaagttgagagaatcggtatcagtcatcaagctggttcggatagtttgcttacttgt
tgtacattcatgaagttgaaagaaaaatactttaatggctcacttgagaaatatgctggt
gtgttgtacggtcttggagttgagaatggacataatatgcactga
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