KEGG   Camellia sinensis (tea plant): 114277192
Entry
114277192         CDS       T07364                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    114277192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114277192
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     114277192
    NSL complex
     114277192
   HMT complexes
    COMPASS/SET1 complex
     114277192
    COMPASS/SET1 complex (yeast)
     114277192
    MLL-HCF complex
     114277192
    MLL3/MLL4 complex
     114277192
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114277192
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_SPT8 eIF2A Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_like Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_WDR75_2nd RMC1_N Beta-prop_Vps41 VPS8_N PROPPIN PALB2_WD40 WD_LRWD1 Beta-prop_VPS8 Big_7 DUF5888 WDR54 Nucleoporin_N Beta-prop_NOL10_N ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 114277192
NCBI-ProteinID: XP_028074877
LinkDB
Position
Unknown
AA seq 313 aa
MESSDPIIRPYKLKQTLTGHKRAISSVKFSDDGNLLASSSADKTARIWSTTSSGSSSLHE
LQGHEQGISDTAFSSDSRYLATASDDKTLRIWDLSTGSLLKTLTGHTNYVFCVNYNPQSN
MIVSGSFDETVRVWDVKAGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDAST
GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI
SSAFSVTNGKYIVSGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPTENMIASGALG
NDKSVKIWSQEED
NT seq 942 nt   +upstreamnt  +downstreamnt
atggagtcgtcagacccaatcatcagaccctacaaactcaaacaaaccctaacaggtcac
aaacgcgcaatctccagcgtcaaattctccgacgacggcaacctcctcgccagctcctcc
gccgacaagaccgcccgcatctggtcgaccacctcctccggctcctcctccctccacgaa
ctccaaggccacgagcaaggcatctccgacaccgccttctcctccgattcccgctacctc
gccaccgcctccgacgacaagaccctccgcatctgggacctctccaccggctccctcctc
aaaacactaaccggacacaccaactacgtattctgcgtcaactataacccccagtctaac
atgatcgtctccggttccttcgacgagactgttagggtttgggatgtcaaggctggaaag
tgcttgaaggtgcttcctgctcattccgaccccgttacggccgtcaatttcaatcgcgac
ggttcgttgatcgtttcgagcagttacgatgggttgtgtcggatttgggatgcatcgact
ggccattgtatgaagacgcttattgacgatgagaatcctccggttagcttcgtcaagttt
tctccgaatggaaagttcattctcgttgggactttggataatacattgaggctttggaac
ttctcaactggtaaatttctgaagacttacacgggtcatgtgaattcaaagtactgcatt
tcgtcggcattttcggtgacaaacggcaagtatattgttagtggttctgaggataattgt
gtatacttgtgggaacttcagacgaggaaaatagttcagaaattggaaggccacactgat
actgtcatatcagtttcgtgtcacccaaccgagaacatgattgcttccggtgcgctcgga
aatgacaaatctgtgaagatctggagtcaagaggaagactga

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