Camellia sinensis (tea plant): 114277250
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Entry
114277250 CDS
T07364
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114277250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114277250
03009 Ribosome biogenesis [BR:
csin03009
]
114277250
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114277250
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
U1 related factors
114277250
Complex B
114277250
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
Helicases
114277250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114277250
NCBI-ProteinID:
XP_028074921
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MASAAAAPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPDTNVTQYERPVASSHTGSAPHKS
SAAHISSSVQVQQSSQGQRRKSGYNDDDDRYSRGSNGGLKPASGTRSYQSEKGGSDHSHN
VPNGEIGAGHGGSSGRGYGPLSIGNGSSAECYRRRHEISVSGDNVPPPLTTFEATGFPSE
ILREVHHAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPGFMHLKRRHNNPQ
LGPTVLVLSPTRELATQIQEEAVKFGKSSKLSCTCLYGGAPKVHQLRDLDRGTDIVVATP
GRLNDIIEMKRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKE
VRKIAADLLVNPVQVNIGNVDELVANKAITQYVEILSPMEKHRRLEQILRSQEPGSKIII
FCSTKKMCDQLSRSLIRQFGAAAIHGDKSQGERDYVLNQFRAGRCPVLVATDVAARGLDI
KDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQRV
PVELRDKASRGGGMGRARRQWGSSSGGRDAGRGGRNDSNYSGRDGGRGSWGIPERGGGRG
PDRESRDSDRYGRSFNGNVDGPGTYHHRSFHERIVRVGDGARDPSRSRSRSRSRSPNKGS
GLGDCRIRTARSRSRSPDKYGRAPPARERSPVRSFHKRVVEHAQSPPPSQHKRVSPYNSD
NARGFKNSVDPKSHPGERSRSPSDGRGKENLRGSYVDAPRERGIANGPRLSYLGEGEEEE
EEGMIHPDEDCMPKAADENPRTSSP
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcggctgctgctccccgttacgctccagaggaccccactcttcccaagcct
tggaaaggtctagttgatggtaaaacgggttatctttacttctggaatccggataccaac
gtcactcagtacgagaggcctgttgcatcttcgcatacaggctcagctccacataagtcg
tctgcagcacatataagttcttctgttcaagttcaacaatcttctcaaggacaacgtcgt
aaaagcggttacaatgatgatgacgatagatatagcagaggtagcaatggtgggttaaag
cctgcttcaggaacaagaagttatcagagtgagaaaggtggatcagatcattctcacaat
gttcctaatggggaaataggtgctggacatggagggtcttctggcagaggttatgggcct
ttgagtataggaaatggttcatctgcagaatgttatcgccgtcggcatgaaataagtgtt
tctggagataatgtgccccctccgcttacaacatttgaagctaccggttttccttcagag
attcttagagaggtacaccatgctgggttttctgcacctactccaatacaggcacagtcg
tggccgatcgctcttcaaggtcgtgacattgtagccattgccaagacaggttcaggtaaa
accttgggttatttgattccaggttttatgcatctcaaacgccgccacaataatcctcaa
ctgggtccgactgttttggttttgtcaccaacgagggagctggcaactcagatacaggag
gaagccgtgaagtttggaaagtcatcaaaattatcttgcacgtgtttgtatggaggtgca
ccaaaggttcaccaattaagagatctagatagaggcacagatattgtggttgccactcct
ggtcgtttgaatgatattatagagatgaaaagagtgagcctccatcaagtctcttatttg
gtgttggatgaggcagatcgcatgctggacatggggtttgaaccacagatacgcaagatt
gtgaaggaggtgcctactcgccgccagaccctcatgtacactgcaacatggcctaaggag
gttcgcaaaattgcagctgatctactggtcaatcctgttcaggttaacattggaaatgtt
gatgagcttgttgccaacaaggctatcacccagtatgttgaaatcttgtcacccatggag
aaacacaggaggcttgagcagatattgcgatctcaagaaccaggatctaagatcattatc
ttttgctcaaccaagaagatgtgtgatcaactgtctcgtagcctaatccgccagtttgga
gctgctgccattcatggtgataaatcccagggtgaaagggattacgtgttgaaccagttt
cgcgctgggaggtgtccagtgcttgtagccactgatgttgcagctcgtggactagacatc
aaagatatcagggtggttatcaattatgacttccctacgggagtagaggactatgttcac
aggataggaaggactggaagggcgggtgccactggagtggcttacacgttttttggtgac
caagatgcaaagcatgcttcagatctcatcaaagttttagaaggggcaaaccagcgtgtc
ccagttgaactccgtgataaggcttcacgtggtggtggaatgggcagggctagacgtcaa
tggggttctagctctggtggacgtgatgcaggccgtggtggacggaatgactccaactac
agtggaagggatggaggaaggggcagttgggggattccagaaagaggtggtggacgtggt
cctgaccgagaatctcgggacagtgacaggtatggtcgcagcttcaatggcaacgtggat
ggtccagggacttaccaccataggagcttccacgaaaggatagttcgtgttggagatggt
gctcgagatcccagccgaagtagaagccgcagccgcagtagaagcccaaacaagggttca
ggattgggtgactgccggattagaacggcccggagccgtagtcgtagccctgacaagtac
ggcagggctccaccagcacgtgaacgttccccagtacgcagttttcataaacgggtggtg
gagcatgctcaatcgcccccaccatcccaacataaacgtgtgtcaccatacaacagtgac
aatgcaaggggattcaagaattctgtggatccaaagagtcatcctggtgagcgatcacgg
tccccatctgatggccgtgggaaggaaaatctcaggggatcatatgttgacgctccgagg
gagcggggaatcgcaaatggaccacggttgtcttacttgggggaaggagaggaagaagag
gaggaaggcatgatacacccggatgaagattgcatgcccaaagcagcagatgagaatcct
cgtacctcttctccgtaa
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