KEGG   Camellia sinensis (tea plant): 114278446
Entry
114278446         CDS       T07364                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114278446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114278446
   03036 Chromosome and associated proteins [BR:csin03036]
    114278446
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114278446
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114278446
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_SPT8 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_DCAF12 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 114278446
NCBI-ProteinID: XP_028076289
LinkDB
Position
Unknown
AA seq 349 aa
MATFGAASNANPNPNKSVEVVQAPSDSVSSLTFSPNANFLVATSWDNQVRCWEIMRTGTT
VGSVPKASMSHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKEI
AWIPEMNLLVSGSWDKTLRYWDLRQSNPVHTQQLPERCYAFTVRHPLMVVGTADRNLIVF
NLQNPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH
REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNNDG
SVYAYSVCYDWSKGAENHNPSTAKTYIYLHLPQESEVKGKPRVGTSGRK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggccactttcggtgctgcttcgaatgcgaatcccaatccgaacaagtcggttgaggtg
gtgcaagctccaagtgattctgtatcaagtcttactttcagtcccaatgccaatttcctt
gttgcaacttcatgggataaccaggtgcgatgttgggagataatgcggactgggaccact
gttggtagtgtgcccaaggcatcaatgtcacatgaccagccggttttatgctcaacttgg
aaggatgatggcacaactgttttctctgggggatgtgacaagcaagttaagatgtggcca
ttactctctggtggccaaccagtgactgtggccatgcatgatgcacctgttaaggaaatt
gcatggatccccgagatgaacctcttagtcagtggaagctgggacaaaactctgaggtat
tgggatctgagacagtcaaatccagtgcatactcaacaacttcctgagcgttgctatgca
tttacagtgagacatccactgatggttgttgggactgcagatagaaatcttatagtcttc
aacttgcagaaccctcagactgagtttaaaaggatcacttcacccctgaagtatcagaca
aggtgtgttgctgcctttcctgatcagcaaggtttcttggttggctcaattgagggaagg
gtaggcgtgcaccatcttgatgattcgcaacaaagtaaaaactttactttcaaatgtcat
agagagggcaatgagatatattcagtcaactcattgaactttcatcctgtacatcacacg
tttgcaactgcgggatctgatggtgcctttaacttttgggataaggatagcaaacaaaga
ctcaaggcgatgtcaaggtgcagccaacctataccttgcagtgctttcaacaatgatggc
tcggtatatgcttactcggtgtgttatgattggagtaagggtgcagaaaatcataatcca
tcaacagcaaagacctacatttacctgcacttgccacaggagtcagaggttaaaggcaaa
ccgagagttggaaccagtggcagaaagtga

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