Camellia sinensis (tea plant): 114278644
Help
Entry
114278644 CDS
T07364
Name
(RefSeq) extensin isoform X1
KO
K13095
splicing factor 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114278644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114278644
Spliceosome [BR:
csin03041
]
Complex A
Other components
Complex A specific factors
114278644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
114278644
NCBI-ProteinID:
XP_028076533
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MSTKVEPASTVEQHRVQTIITANTSAASASSPKISMFAAKSGFVIPKNKLSGSLVPIFRG
GKKPGGSDAVNEESTKQVQRKTKWGPDLTQDAAVRKGRAVAYQTRVDQITKRLNSGILET
RDNQDSPLSAPIPNHESSVQIKSEKSESLELERREAIGEILKLNPSYKAPKDYKPLLKEA
KVSVPIKEYSGYNFIGLIFGPASDTQKRLEKETGAKVRVYGTKADTGEKGEITPSDGNEA
LVAYAELYVHISADTYEKVDAAVSLIELLVTPVPVNPSAVSTTSTSVSADNVNAVDQSQG
TSTPYIISAVEVNQKAAQSFMGSVQTPQVQFQPHPGPWFPAGPPQSPMRLPSGFIFPPNP
SAPMLNNLFQASSSSFNPSHMPSLFGPRPVLPAGLGSVPQNPSLVPSRAQPPVLQRPFMP
QAPFGHAGSPRNPPMAASQPSPAQPSISAPPPPPHTGNQPPSIVRSLGPSSSQPVSTRPS
SGSLPDRMLPPAGSSTQWSQALSATPPSLRPGSMSQMAPPVVPQGPHPVTPQPIIASGPP
LYNITTVNMVSPVAFPPRRPSGPEPYITSGNRPPVFTSGPQPPQAWLPPASSSFVPNQLS
APMSAPRPIQSPSPVASMQLIIAQGGPVTPNPIPNPLLGGSMPIALQVASTSTSTPPPPP
QAGIPSSALGSAPTFAPIKPPSLTAPKPQHPNSSDFTFQPHRPQNLITQAVPRPGIQPTI
QNMRPPNPTAQLPMAPQTPSFRPAIQTSSPPVMQGIPRPPLNNQMNQTHSQVSSFAGNPT
ITTAPPRHPSFPNPNSSLVPQMGHRKLNPSPHVGNMGGGPGPFPRRPGNPVQQQLQQNYL
SAVGRPQSHLAPNQQQLGSNLPSASSSGRPAAASSSPGAQQNYDPFSPTSISTVPLQGQG
QGGNPLKTRKQESDPEYDDLMASVGVK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaaggtcgagccggcatctacagttgaacagcaccgtgttcagaccattata
acagctaacacatctgcagcatcagcaagtagcccaaagatatctatgtttgctgcaaaa
tcaggatttgtaatacctaaaaacaaattatcaggttcattagttcccattttccgtggt
ggtaaaaagcctggaggcagtgatgcggtgaatgaagaaagtactaaacaggtgcagagg
aaaacaaaatggggccctgatcttacacaggatgccgctgttagaaaaggaagagcggta
gcttatcagactcgagtagatcaaattacaaaaaggctaaattcaggaattttggagaca
agagacaatcaagactcaccattatcagccccgattccaaatcatgaatcttcagttcag
atcaagagtgagaagtcagaatcgttggaactagaaaggcgggaggctattggtgaaata
ctgaagttgaatccaagctacaaggccccgaaagattataaacccttgttgaaagaggct
aaagtttctgtccctatcaaagaatattcagggtacaattttattggtctaatatttggc
cctgcaagtgatactcaaaaacggttggagaaggaaacaggagctaaagtccgagtttat
ggtaccaaagcagatacaggagagaagggtgaaattacaccatcagatggaaatgaagct
cttgttgcttatgctgagttatacgttcatatatctgctgacacatatgagaaggttgat
gctgcagtttccctaattgaactgcttgtcaccccagttccagtaaacccatctgctgtt
tccacaacatcaacttctgtttctgctgataatgtgaatgctgttgatcaaagtcaaggt
acatccaccccttatataatatctgctgtggaggtgaatcagaaagcggcacaatcattc
atgggatctgtccaaactccacaagttcagtttcagccacatccaggtccatggttccca
gcagggccacctcagagtcctatgcgtctgccttctggattcattttccctccaaatcct
tcagcaccaatgctcaacaatcttttccaagcatcatcatcttcttttaatccctcacat
atgccttcactatttggtcctcgaccagttctccctgctggtcttggctctgttccacaa
aatccttctcttgttccctcccgagcacagccaccagttttgcagcgcccttttatgcct
caggcaccttttggtcatgctggctcaccaagaaatcctccgatggcagcttcacaacca
tcacctgctcaacccagtatttcagctccaccaccacctccacatactggcaatcaacct
ccctcaattgtaaggtcattagggccttcttcgtctcaacctgtgtccaccagaccttcg
tcaggatcactccctgacaggatgttgccccctgctgggagttctactcagtggtctcaa
gcactgtctgccactcctccatctcttcgtccaggcagcatgtcacagatggcaccccca
gtggttcctcagggtcctcatcctgtaaccccacaacccatcattgcatctggaccgcca
ctatataatattacaacagtgaatatggtttcacctgtagcctttccccccaggcggcca
tctggtcctgagccttacattacatctggaaaccgtcctcctgtcttcacttctggccca
cagccgcctcaagcatggcttcccccagcatcatcatcttttgttccaaaccaattgtca
gcacctatgtctgcccctagaccgatccaatctccatcaccagttgcgtctatgcaactg
ataatagcacaggggggtcctgtgacgcctaatccaattccaaatcctttattgggggga
tcgatgccaattgctctgcaagtggcatccacatccacatcaacaccaccaccacctcca
caagcaggaattccaagttctgctttgggaagtgcaccaacttttgctcctataaaaccc
ccttctctaacagctccaaaaccacaacatccaaactcgagtgatttcacttttcagcct
caccggccccagaatctaatcactcaagcagttccaaggcctggcattcaacctacaatt
cagaatatgcgacccccaaatccaacagcacaactacctatggcacctcaaacaccatct
ttccggcctgccattcaaacttcatctccacctgtcatgcaaggcatcccaagaccaccg
cttaacaatcagatgaatcaaactcacagccaagtatcttcctttgctggaaatccaact
atcactacagctccacctagacacccatcattcccaaatccaaatagttctcttgtccca
caaatgggacacaggaaattaaatccatctccccatgtgggaaatatgggtggtggtcca
ggtcctttccctcgtaggccaggaaatcctgtgcagcagcagcttcagcaaaattatcta
tctgcagtgggtcggccacagagtcacttggctccaaatcaacagcagctaggtagcaat
ttgccctctgcatcatcatctggtaggccagcagctgcttcttctagtcctggagcacag
caaaattatgatccattctcgcccacttctatttctactgtacctcttcagggacaggga
caaggaggtaatccattaaagacaaggaagcaggagagtgatccagagtatgatgacttg
atggcttcggttggagtaaaataa
DBGET
integrated database retrieval system
