Camellia sinensis (tea plant): 114278692
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Entry
114278692 CDS
T07364
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114278692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114278692
03009 Ribosome biogenesis [BR:
csin03009
]
114278692
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114278692
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
U1 related factors
114278692
Complex B
114278692
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
Helicases
114278692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
114278692
NCBI-ProteinID:
XP_028076591
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MSRYDSRSADPGSYRDRRTDSGFGGASSYSGARSSSKKDYDGAESPRKLDLDGLTPFEKN
FYTESPAVAAMSESEAEEYRKRREITVEGRDVPKPVKAFRDVGFPEYVIQEIVKAGFTEP
TPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTR
ELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHT
NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNP
YKVIIGSQDLKANHAIRQHVEIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR
QLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFP
GSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLIVILEEAGQKVSPELAAMGRGAP
PPPGHGGFRDRGRGYGGGRPWS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccgccgaccccggctcctaccgcgaccgccgaactgat
tcagggtttggtggtgcttcgagttacagtggagctcgttcatcgtcgaagaaggactac
gatggggcagagtcaccgcgcaagttggatttggatgggttgactccgttcgagaagaat
ttctacacagagtcgcctgctgtggcagcaatgtcggagagtgaagctgaggagtatcgg
aagcgaagggaaatcaccgttgaaggccgggatgtgcccaagcctgtcaaggctttcagg
gacgttgggtttccagaatacgtcattcaagaaattgtaaaagctggctttactgaaccc
acacctattcaagctcaaggatggccaatggctttaaagggccgtgatctagttggaatt
gctgaaacaggttcaggaaagacacttgcctacctattgcctgcaattgtccatgtcaat
gctcagccaattttagctcctggagatggtcccattgtgttagttttagctccaacccgc
gaacttgctgttcagatacagcaagaagctacaaagtttggtgcatcatcaaggattaaa
aatacctgcatatatggtggggttccaaaggggccccaagttcgtgatctccagaaaggt
gttgaaattgttatagctactcctggaaggttgattgatatgatggaatctcatcatacg
aacttgcgaagggttacataccttgtgttggatgaggcagatcgaatgcttgacatgggc
tttgatcctcagattcgaaaaattgtttctcagattcgcccagatcgtcaaaccttgtat
tggagcgctacgtggcccaaggaggttgaacaacttgcgagaaaattcctttacaaccca
tacaaagttattataggttctcaagatttgaaagctaaccatgcaattcgccagcatgtg
gaaattgtttctgagaatcagaaatataacaaattagttaagttgctggaggatattatg
gatggtagccggattctgatattcatggatacaaagaaagggtgtgaccagatcactagg
cagcttcgcatggatggctggcctgctctctctattcatggagataagtctcaagcggag
agggattgggtcctttcggagttcaaagctggcaagagtcctataatgactgcaacagat
gttgcagctcgtggtttagatgtgaaggatgtgaaatatgtgatcaactatgacttccct
ggatcgctggaggattatgttcaccgcattggccgaacaggaagagctggggccaaagga
acagcatacacttttttcacagctgcaaatgccagatttgcaaaagaccttatagttatc
cttgaggaagctggacagaaggtcagtcctgagctggcagcaatgggtcgtggtgcacct
cctcctccaggtcatgggggttttcgagaccgtgggcggggatacggtggtggtcgccct
tggagctaa
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