Camellia sinensis (tea plant): 114278746
Help
Entry
114278746 CDS
T07364
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114278746
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114278746
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114278746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
rpo30_N
AAA_16
DUF724
Motif
Other DBs
NCBI-GeneID:
114278746
NCBI-ProteinID:
XP_028076665
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MKTLHPLTSFAHLHISCNQNLSISSSRNAHSNLNLSFCCFKSLRTLTPNHSKQFRASYKF
PKSLFSAEPQLSDADEEEEDDEEDDDDDDEEAAEEYEDFSGEVSDGAEQSEDEFEISVDD
VSETKSRFEEFKWQRFERLRNEVREFGEEIIDVNELASVYDFRIDKFQRLAIQAFLRGSS
VVVSAPTSSGKTLVAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDNSVGLLTG
DSAVNKDAQVLIMTTEILRNMLYKSIGMVSSESGLFHVDVIVLDEVHYLSDISRGTVWEE
IVIYCPKEVQLICLSATVANPDELAGWIAQIHGKTELVTSSKRPVPLTWHFSTKTSLVPL
LDEKGTSMNRKLSLNYLQLSSSGIKPDKDERPRRRFSKKRESDMSYNTNANMNEQFLSKN
DRNTIRRSQFPIFQVPQVIDTLWHLHSRDMLPAIWFIFSRKGCDAAVQYLEDCKLLDECE
MSEVELALKRFRIQYPDAFRESSMKGLLRGVAAHHAGCLPLWKSFVEELFQRGLVKVVFA
TETLAAGINMPARTAVISSLSKRSESGRIQLNSNELLQMAGRAGRRGIDKRGHVVLLQTP
YEGAEECCKLLFSGLEPLVSQFTASYGMVLNLLAGGKVTRRSNESDDMKASQAGRTLEEA
RKLVEQSFGNYVGSNVMLAAKEELTKIQKEIEMLTSEISDEAIDRKSWKLLSDRAYKEIA
DLQEELRAEKVLRTELRRRMEIERISAFRPLLEELEDGHLPFMSLQYNDAEGVQHLVPAV
FLGKVDSLEGSKLKNTVYADDSSSLNVVRPEFYCGDTEKKHNIKLSYYVALGSDNSWYLF
TEKWIKKVYKTGLPNVALAHGDALPREIMRMLLDKEEMQWQKLSNSELGGFWSMEGSLET
WSWSLNVPVLSSLSEDDEVSQFSQAYHAAVESYKDQRNKISRLKKKISRTEGFREYKKIV
DMAKFTEEKIRRLKARSNRLIGRIEQIEPSGWKEFLQVSNVIHEARALDINTHMIFPLGE
TAAAIRGENELWLAMVLRNKVLLDLKPAQLAAVCGSLVSEGIKVRPWKNNSFIYEPSSTV
IKVINFLDEQRSSLVQLQEKHGVKISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDL
ARLLRRTIDILAQVPKLPDIDPLLQSNAVTASNVMDRPPISELAG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactccatcctctcacctccttcgcacatctacacatctcctgcaatcaaaac
ctctctatttcttcatccagaaacgcccattcgaacctcaatttaagcttttgttgcttc
aaatcacttcgcacactcactccaaatcattcaaagcaatttcgagcctcgtacaagttt
ccgaagtcacttttctccgcagagccacagctctccgatgccgacgaagaggaggaggac
gatgaggaagacgacgacgatgacgacgaagaagcggctgaggagtacgaagacttctcc
ggcgaggtttccgacggtgcggaacagagcgaagatgaatttgaaatctcagtggacgat
gtctcggaaacgaagtctcggttcgaggaattcaagtggcagagatttgagaggcttcga
aacgaagtcagagagttcggagaggaaattatcgatgtcaatgaactcgcttcagtttat
gatttccgcattgataaattccagcgattggcgattcaagcgttcttgagaggttcgtca
gttgtagtgtctgcgccgacgagcagcggcaagactttggtagccgaagctgcagcagtt
gcaacagtggcgagaggaaggagaattttctacaccactcctcttaaggcgctatcaaat
caaaaatttcgcgagttccgtgagacatttggtgataacagtgttggtcttcttactgga
gattctgctgtcaacaaagatgctcaggttttaatcatgactactgagattctgcgcaac
atgttgtataagagcattgggatggtttcatctgaaagtggactatttcacgttgatgtg
attgttttggatgaagtgcattatctaagtgacatttctcggggtacagtttgggaagag
atagttatctattgcccaaaagaagttcaactcatatgtttgtccgcaacagttgcgaat
ccagatgaattagctggctggattgctcaaattcatggtaaaactgagttggtgacatca
tccaagcgtccagttccattgacttggcacttctccacaaagacatcattggtacctctt
ctggatgagaaaggaacaagcatgaataggaagctgtcactcaactatctacaacttagt
tcatctggaattaaaccagacaaggatgagcgacctagaagaaggttttcaaaaaaacgt
gaaagtgacatgagctacaacactaatgctaatatgaatgaacaatttctatcaaagaat
gacagaaacaccattcgccgctcacaatttccaatatttcaggttcctcaagttatagat
acattgtggcaccttcactcaagggatatgctaccagcaatttggtttatctttagtagg
aaaggatgtgatgcagctgtccagtatcttgaagattgcaaacttctagatgagtgtgag
atgagtgaggttgaactggccttgaagaggtttcgtattcagtatcctgatgctttcagg
gagtcttccatgaaaggccttctgcgaggggttgctgcacaccatgctggctgtctacct
ctttggaagtcatttgtagaagagttgtttcagcgtgggcttgttaaggttgtttttgct
acagaaacgcttgctgctggtatcaacatgcctgctaggacagctgttatctcatctctc
agcaaaaggagtgagagtggacgtattcaattaaactcaaatgaattgcttcaaatggct
gggcgtgctggacgaagaggcattgataaacggggtcatgtagttcttttgcagactccg
tatgagggggctgaagaatgctgcaagcttctcttttctggacttgaacctcttgtttca
caatttactgcctcatatgggatggtgttgaatcttcttgcgggtggaaaagttactcgt
agatcaaatgaatcggatgacatgaaagcttcccaagcaggacgaactttggaagaagca
aggaagttagttgaacagagctttggaaattatgtggggagcaatgttatgctggccgca
aaagaggagcttactaaaatacagaaagagattgaaatgcttacttcagaaattagtgat
gaagctattgacagaaagagctggaagctgctatcggatagggcatataaggagattgct
gatctgcaagaagaattaagggcagaaaaagttctacggactgaactgcggagaaggatg
gaaattgaaagaatttctgctttcagacctctattggaggagttggaagatggacatttg
ccttttatgtctttgcaatataatgatgctgaaggtgttcaacatttagttccagctgtt
tttttgggaaaggttgattctctagaaggttctaaactcaagaacaccgtttatgctgat
gattcttcttcattgaatgtagtcagaccagaattttattgtggtgatactgaaaagaaa
cacaatatcaaactatcttattatgtggccctcggttcagataattcttggtatcttttc
acagagaagtggattaaaaaagtgtataaaacaggcttacctaatgttgccttggctcat
ggtgatgctttgcctcgggagattatgaggatgctacttgacaaggaggaaatgcagtgg
cagaaactatcaaattctgaacttggtggtttttggagcatggaaggatctctagaaacg
tggtcttggagcttaaatgtgcctgtgttgagtagtctttctgaagatgatgaggtttca
caattttcacaagcataccatgctgcagtagaatcttacaaggaccaaagaaacaaaatc
tcacgtttaaagaaaaagatatcacgtacagaaggctttagagaatataagaagatcgta
gacatggctaagtttactgaggaaaaaattcggcgcttgaaggctagatcaaatcgcttg
attggtagaatagagcaaattgagccatctggctggaaggagtttctgcaggttagcaat
gtcatacatgaagccagagcattggatatcaatacacacatgatatttcctcttggtgaa
actgcagctgcaattcgaggagaaaatgaactctggcttgctatggttcttcgaaataaa
gtgttgctagatctaaaacctgcacagcttgctgctgtctgtggaagtttagtttctgaa
gggattaaagttcgtccgtggaaaaataacagctttatatatgaaccttccagtactgta
ataaaagtcatcaactttttggatgagcaaagaagctcccttgtgcaacttcaagaaaag
catggtgtaaagatatcatgctgtttggatagccaattttcaggcatggtagaagcctgg
gcttctggattaacttggagagaaattatgatggattgtgcaatggatgaaggtgatcta
gctcgcctcttacgacggacgattgatatattagctcaggttccgaaattgccagatatt
gacccattgctgcaaagcaatgcggtgactgcatcgaatgtcatggaccgcccaccaatt
agtgaactggctggatga
DBGET
integrated database retrieval system
