KEGG   Camellia sinensis (tea plant): 114279256
Entry
114279256         CDS       T07364                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114279256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114279256
   03041 Spliceosome [BR:csin03041]
    114279256
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114279256
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114279256
Spliceosome [BR:csin03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114279256
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 114279256
NCBI-ProteinID: XP_028077287
LinkDB
Position
Unknown
AA seq 464 aa
MDPIKKRKLDENGVALPDSDAGPNQLTVDDARKIIEPFTHEQLLEIVKNAAVRHLDVLDA
VRSIADRDPAQRKLFIRGLGWDTTTEKLRSLFSAYGDLDEGVVILDKATGKSKGYGFVTF
KHVDGALLALKEPSKKIDGRMTVTQLAAAGIQPTVNPHSGVDVSARKIYVANVPHDMPGD
RLLAHFLSYGEIEEGPLGFDKATGKSRGYALFVYKTIEAARASLVDPIKTIDGHQLNCKL
AIDGKKGKPEMPVAAPGAGGVQGPTGVPGEAHGNGLGMHHPPSSMPGSLAAQYGVPVGSY
GGFSGGLQGHHPLNSSMGGVPGLSSVGGAAAAGPVLSSMGNQAPSSLGATGAYGSGLGGP
YGGSHYGGPGSTLYGGLGGATGGLGGSGGGFGGVGSGLGGAGRGSSLYGLPPSSGGMPSG
SYPESAHYSLSSSGYSSQQSHPAGTSPATRVPPGGMYQSGPPYY
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggacccaatcaagaagcgaaagctcgatgaaaacggcgtcgcactaccggactccgac
gccgggccgaaccagctcacagtcgacgacgctcggaagatcatcgaaccgttcacacac
gaacagctcctcgagatcgtaaaaaatgccgccgttcgccacctcgacgtcctcgacgcc
gtccgatcaatcgccgatcgcgacccagctcagcgaaagctcttcattcgcggtctcggt
tgggacaccacaaccgagaagcttcgctctctcttctccgcatacggagacctcgatgaa
ggcgttgtgatactcgataaagccacaggtaagagtaaaggttatggctttgttactttc
aagcatgttgatggggctttgttggcattgaaggaacctagtaagaaaattgatggtcga
atgaccgttacgcagcttgctgctgccggaattcaacccactgtgaatccgcattcgggt
gtggatgtgtcggcgaggaagatttatgtggctaatgtgcctcatgatatgcctggggat
agattgttggcgcattttttatcgtatggggagattgaggaagggcctttgggtttcgat
aaggcgactgggaagtcaagagggtatgctttgtttgtttataagactattgaggctgct
agggcttcgctggttgatccgattaagacgattgatgggcatcaattgaattgtaaattg
gcaattgatgggaagaaagggaagccagagatgcctgttgctgcaccaggggctgggggg
gttcaggggccgactggggttcctggtgaggctcatggaaatgggcttgggatgcatcat
ccaccttcttctatgcccggttcgctcgctgcacagtatggcgtgcctgttggttcgtat
ggtgggttttcgggtggattacagggtcatcatcctttgaattcatcaatgggtggtgtt
cctggattgtcctcggtgggtggtgctgctgctgctggtcctgtgttgtcctccatgggc
aatcaagcaccatcttctttgggtgctactggtgcttatggttctgggttgggtggtcct
tatggtggttctcattatggtgggcctggttctactctatatggaggattaggtggtgcc
actgggggattgggtggcagtgggggcggttttggtggcgttggaagtgggttgggtggt
gctggccgcggatcttcattgtatgggttgccacctagctcaggtgggatgccttctggc
agttatcctgagagtgcacattatagtttgtcgtcttctggttattctagccagcaaagc
catccggctggaacatcacctgccactagagttccacctgggggaatgtaccaaagtggc
cccccatactattga

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