Camellia sinensis (tea plant): 114279394
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Entry
114279394 CDS
T07364
Name
(RefSeq) uncharacterized protein LOC114279394
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114279394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114279394
03009 Ribosome biogenesis [BR:
csin03009
]
114279394
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114279394
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
U1 related factors
114279394
Complex B
114279394
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
Helicases
114279394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
PRAI
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
114279394
NCBI-ProteinID:
XP_028077424
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSYVPPHLRNSIATKTTTTSSTTTLEPSTTTPTTTDHYHKFNSHSSTANGNVNNYSTSSF
SNAARRSSVPDHVLPHWKPSERVLRLTPEQIEEVRLRLNVDVDVASESSPAPAPIESFTD
MCLHPSIMKDIAFHEYSTPTSIQAQAMPVALSGRDLMGCAETGSGKTAAFTIPMIQHCLV
QPPIHRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIVVGGTNIAEQRSELRAG
VNIVVATPGRFIDHLQQGNTSLSRVSFVVLDEADRMLDMGFEPQIREVMWNLPEKHQTLL
FSATMPTEIEALAQEYLTNPVRVKVGKVSSPTANVAQILVKVSENEKLDQLLALLVEEST
QAERSGHPFPLTIVFVERKTRCDEVAEALIAQGLHAVVLHGGRSQSEREAALHDFRVGST
NILVATDVASRGLDVTGVAHVVNLDLPKTMEDYVHRIGRTGRAGSTGQATSFCTDRDMFL
VAQIKKAIADVESGNTVAFATGKVARRKEREAATAQKEARTALSKLSLVGPTSINVEDKY
RYMIAPSMIKTEGAADGAWDD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgtgcctccgcatctgaggaactcgatcgccaccaaaaccaccacaacctct
tcaactacaaccctagaaccttctactactactcctactactactgatcattatcacaag
ttcaactctcattcctccaccgccaacggcaacgtcaacaactactcaacctcctccttc
tccaatgcagctcgccggagctccgttcccgaccacgtcctcccccactggaagccctcc
gaacgcgttctccgtctcactcctgaacagattgaagaggtccggctacggcttaacgtt
gatgttgatgtagcttcagaatcctctcctgcaccagcaccaattgaatcctttacagac
atgtgcttgcacccaagcatcatgaaggatattgcctttcatgaatacagtacgcccact
tctattcaggctcaagccatgccggttgctctaagtggaagggatcttatgggttgtgca
gaaactggtagtggaaaaactgctgcattcaccattccgatgatacagcattgcttagtt
caacctcctattcaccgtggtgacgggcctttggcattggtattggctccaacgagagaa
cttgcccaacaaatagagaaagaggtcaaagcttttagtagatctctggagtccttcaga
actgcaatagttgtgggtggaacaaacattgctgagcagaggtctgagctacgagcagga
gtgaatatagtggttgctactcccggaagatttattgaccacttacagcaaggaaacact
tctctatctagagtttcatttgttgttttggacgaagctgatagaatgcttgatatgggc
tttgaaccacagataagagaagtgatgtggaatcttccagaaaagcatcaaactttgctg
tttagtgcaacaatgcctacggagattgaagcacttgcacaggaatacctgactaatcca
gtgcgagtaaaggtgggaaaggtgagcagcccaacagcaaatgtagcccaaattttggtg
aaggtttcagaaaatgagaagcttgaccagcttctagcgctgcttgttgaggaatccact
caggctgaaagatctggccacccatttcctttgaccattgtttttgtggagaggaagact
aggtgcgatgaagttgcagaggcgttgatagctcaaggtttgcatgcagttgttcttcat
gggggccgcagtcaaagtgaaagagaggcagctcttcacgattttagggttggctctaca
aacatcctggttgccactgacgttgcatctcgtggattggatgtcactggagttgctcat
gttgtgaatcttgatcttccgaagaccatggaagactatgtacaccgaatcggaaggaca
gggcgtgcaggatcaacaggccaagctacttcattttgtactgatcgtgacatgttcctt
gtggcacaaataaaaaaagcaattgcagatgtggagtctggtaatactgtggccttcgca
accggcaaggttgctagaaggaaggagagagaagcagccactgcacagaaagaggcaagg
actgcactgtccaaactctcattggtggggcccacgtcaatcaacgtagaggacaagtat
agatacatgatagctccatcaatgatcaagaccgaaggtgcagcagatggtgcttgggat
gattga
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