KEGG   Camellia sinensis (tea plant): 114280223
Entry
114280223         CDS       T07364                                 
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
csin  Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:csin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csin04121]
    114280223
Ubiquitin system [BR:csin04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     114280223
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR35_TULP_N NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC3 PH_NF1
Other DBs
NCBI-GeneID: 114280223
NCBI-ProteinID: XP_028078367
LinkDB
Position
Unknown
AA seq 766 aa
MESLCFHDGNITDLIDKRTLDVRHDIGRSLQMHSSLIQRLSMERQLEGHSGCVNAVAWNS
KGSLLISGSDDTRVNIYSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLRGRGPDEYDISPSAVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREA
SSCPPARSSHQECRNVLLDLRCGAKKSLADPPKQLLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSCRKKLSPPPCVNYFCPMHLSDQGHSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDLNHAGGTSMQYTSADASKIMTFSPTLNGVELQSSILGALQNGFHLKRNVSAMF
LQHEKCRKLVQIAEKSLMDNTNYFHGIEACNEVLDAHGHEIEPVLMHECLCIRAALFLKR
KWKNDAYMALRDCHKARRINSSSFRAFHIQSEALLQLGKYKEALEFAISAQSMAPLDSEV
AATLENIQKHLAAAEAEKNNKANDGAPKSDPRSGKVLSLSDILYRSEANSDASQDGPRSE
REDSDYDEELELDFETSISGDEGRDVEPNVLHGSLNLRIHRRGDTAMETGRANGSCGSPM
SSSQNDRTTYQSEGVIDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFIWEKR
TGRLIKVLVGDDAVVNCVQCHPFDCVVATSGIDNTIKIWTPTASEPSIVAAGAAGPENNN
VLEAMESNQRRLCHNREMILPFELLERFRMHEFSEGTLHPFECAQS
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggagtcactctgctttcacgatggtaacatcaccgacttgatcgacaaacgaactctc
gatgttcgccacgacattggtcgcagtttgcaaatgcactcttcgttgatacaaaggctt
tcgatggaaagacaattggaggggcattctggttgtgtgaatgctgtggcttggaactca
aaaggctcactcctgatatctggatctgatgatacacgagtcaacatttatagctattca
agccggaagcttttgcattctattgagactgggcattcagccaatatattctgtacaaaa
tttgtccctgaaacttctgatgaattagtggtctctggtgctggagatgctgaagttcgg
ctttttaatctgtctcgtttaaggggtaggggacctgatgaatatgatattagtccatca
gcagtgtttcaatgccacagtaggagagtgaaaaaattagctgtggaagttggaaatcca
aatgttgtatggagtgcaagtgaagatgggactctgaggcagcatgattttcgagaggct
tcatcttgtccaccagctagatcatctcatcaagaatgtcgtaacgttttacttgacttg
cgatgtggggcaaagaagtcattagctgatcctcctaagcagctactagctctgaaatct
tgtgatataagttccactaggcctcatttgctccttgttggtgggagtgatgcctttgct
cgtttatatgatagaaggatgctaccaccactctcatcttgtcggaagaagttatcacca
cctccttgtgtcaactatttctgcccaatgcatctttctgatcaaggtcattctagcttg
cacctgactcatgttacatttagtccaaatggagaagaggttctccttagttatagtgga
gaacatgtttacttaatggatttaaatcatgctggtggtacttcgatgcaatatacgtca
gcagacgcttcaaagattatgacctttagtccaacactcaatggagtagaattgcagtct
tcaattttgggtgccctgcaaaatggttttcatttaaaaagaaatgtctctgccatgttt
ctacagcacgagaagtgcagaaaattggttcaaattgcagaaaaatccttaatggataat
acaaattattttcatggaattgaggcttgcaatgaggttttggatgctcatggtcatgag
attgaacctgtgctaatgcatgagtgtctatgcatccgcgcagccttgttcctcaagcgg
aagtggaagaatgatgcttatatggctctaagggattgccacaaagctaggaggattaat
tcttcttcttttagggcatttcacatacagtctgaagctttgttgcagctgggaaaatat
aaagaagctctagaatttgctatttcggctcaatcaatggcaccattggattctgaagtt
gcagcaactttggagaacatacaaaagcatcttgctgcagctgaagctgaaaagaataac
aaggcaaatgatggagcgcctaagtctgaccctcgatctggaaaagtattatcattgagt
gacatactttaccggtcagaggctaatagtgatgcttcacaagatggtccgaggtctgaa
agagaagactctgattatgatgaggaattggagttggattttgaaacatcaatatctggt
gatgaagggcgtgatgttgaacccaatgttcttcatgggagtttgaatttaagaattcat
agaagaggcgatacagctatggagactggtcgtgcaaatggttcctgtgggtcaccaatg
tcatcatctcaaaatgatagaacaacttatcagtctgagggggtgatagatatgaagcag
agatatgttggccactgtaatgtggggacagacataaagcaagccagttttcttggccaa
agaggtgaatacgttgctagtgggagtgatgatggcagatggtttatatgggaaaagaga
actggtaggctaataaaggtgcttgttggtgatgatgctgttgtcaactgtgtgcaatgc
catccgtttgattgtgttgtggctaccagtggaattgataacaccataaagatttggact
ccaactgcttcggaaccttccattgtggctgctggagctgcaggaccagagaataataat
gtgttggaagctatggagagcaatcagcgtagactatgccataatcgtgaaatgatcctg
ccctttgaacttttggagcggttccggatgcatgaattttctgaaggaaccctgcatcca
tttgaatgcgcacaaagttaa

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