Camellia sinensis (tea plant): 114280289
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Entry
114280289 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114280289
03015 mRNA surveillance pathway
114280289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114280289
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114280289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Nup35_RRM_2
NPR3
Motif
Other DBs
NCBI-GeneID:
114280289
NCBI-ProteinID:
XP_028078437
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MAKPGRGRPATPSGSGSGSSPSRSRSRSSTGSDSRSSSRSRSRSRSSSSSPSRTASSRSR
SPPPQRKRCTHNQRGRSPPLQSKKTSPPPRKTSPFPSLVFFMDQLSRNVNEAHLKEIFSN
FGEVVNVRLVMDHAVNLSRGFGYVEFKIRTDAEKALAYMDGGQIDGNVVRAKFTLPERKK
VSPPPKVVPTVSKRDAPKIDNVGADVEKDGPKRQREPSPRRKPHSPLRRRSPIARRGGSP
RREPDSPLRRRVDSPVRRRGESPYHRGETPPRRRPASPGRGRSPSSPPRRNRSPARASPR
RIRGSPIRRRSPIPPRRRSPPPRRARSPPRRSPVNRRRSRSPIRRPVRSRSRSISPRRGR
APVPRRGRSSSYSDSPSPRKVGRRVSRSRSPRRPLRGRSTSNSSSSSSPPPPRKP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccaggccgaggtcgtccagcaactccatcggggtccggatcaggttcgtct
ccgtctcgctctcggtcccgctcctccaccggttcggactctcggtccagctcgcgctcc
cgatctcgttcccgctccagttcttcttctccctctcgcaccgccagttctcgcagccga
agcccccctccccagagaaaaaggtgcacacacaatcagcgaggtcgctccccaccacta
caatctaagaaaacttctccacccccaaggaaaacgtctccattcccgagtctcgtgttc
ttcatggaccagcttagcaggaatgtgaatgaagcccatttaaaagaaatattcagtaat
tttggagaagttgttaatgtacggctggtaatggatcatgccgttaacctttcaagagga
tttggatatgttgagttcaagataagaactgatgctgaaaaagccctagcatacatggat
ggtggccaaattgatgggaatgttgttcgagcaaagttcacgctacctgaacggaagaag
gtttcaccaccacctaaggtggttcccactgtatcaaagagagatgctccaaaaattgat
aacgttggtgctgatgttgaaaaggatggaccaaagcggcagagagaaccttctccccgt
cgcaagcctcactctcccttgcgaagaagatcacccatagctcgaagaggtggatctccg
agacgagagccagactctcctctgcgtcgacgcgtggactctcctgttcgtcgtcgagga
gaatctccttaccaccgtggtgaaacacctcccaggaggaggcctgcatctccaggcaga
ggtcgttcaccttcctccccaccaaggaggaatagatcaccagcaagggcctctccccgg
aggattcgtggcagtcctattcgcagacgctctcctattccaccaaggcgccgttccccc
cctcctagacgagctcgaagtccgcccagaaggtctcctgttaatcgtagacgcagccgc
tctcctattcgaaggcctgtgcgttcacgttcaagatcaatctctccacggagaggtcga
gcaccagttccaaggcgtgggaggtcgtcatcttactcagattcccctagtccacgcaag
gtagggcgaagggtatcgaggagccgtagtcctcgaaggccgttgagaggtagaagcact
agcaacagcagcagcagcagttcgccaccaccacctcgtaagccatga
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