KEGG   Camellia sinensis (tea plant): 114280708
Entry
114280708         CDS       T07364                                 
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
csin  Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:csin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csin04131]
    114280708
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csin04147]
    114280708
Membrane trafficking [BR:csin04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    114280708
Exosome [BR:csin04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114280708
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_SPT8 WD_LRWD1 TPR_GEMI5 TPR_12 Beta-prop_DCAF12 HEAT_GCN1
Other DBs
NCBI-GeneID: 114280708
NCBI-ProteinID: XP_028078879
LinkDB
Position
Unknown
AA seq 914 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMVKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERFVWAIGYMKRSRRVVIGYDEGTIMVKI
GREEPVASMDNSGKIIWAKHNEIQTVNIRSVGADYEVTDGERLPLAVKELGTCDLYPQSL
KHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNF
QEKRSIRPTFSAERIYGGTSLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA
IASDASFYIIKYNRDVVSAHLDSGKPVDEQGVEDAFELLYEINERVRTGLWVGDCFIYNN
SSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVGYTLLLSLIEYKTLV
MRGDLERANEILPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGKLDVAK
EIATGSQTESKWKQLGELAMSTGMLEMAEDCLKSAMDLSGLLLLYSSLGDAEGMSKLASL
AKEQGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMARSYLPSKVPEIVAIWRKDLN
KVNLKAAESLADPEEYPNLFEDWQVALEVESKVAETRCFYPPAAEYVKYADKSRVNLVEA
FRNLQVDEDTPFENGDLNHEVEEQNGDEDGQEEAQDEGQEEAVVIDADSTDGAVLVNGSE
ADEEYVLTPHHENQ
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgcctctcagactagaaataaagagaaaacttgctcaaagatcagaaagagtgaagtct
gtggatctgcatccaacagagccatggattctggcaagcttgtattccgggactgtttgc
atctggaactatcagtctcagacgatggtgaagtcttttgaggtgactgagttaccagtt
cgatccgcaaagttcattgcgcgcaaacaatgggttgttgctggtgctgatgacatgtat
attcgtgtttacaactacaatacaatggataaggtcaaagtatttgaggcgcacacggat
tatattaggtgtgtggctgttcatcctacccttccatatgtgctttcatcgtctgatgac
atgcttataaagctttgggattgggagaagggctgggtgtgtactcaaatttttgagggt
cattctcattatgttatgcaagtgacatttaatccgaaagacaccaacacatttgcaagt
gcatctcttgatcgcactataaagatttggaatctgggctctcctgacccaaattttaca
ttggatgcccatttgaaaggggtaaattgtgttgattacttcacaggtggtgataagcct
tatcttataactggttctgatgatcatactgcaaaggtgtgggactatcaaaccaaaagt
tgtgtccagacactagacgggcacacccacaatgtttcagctgtttgttttcaccctgaa
cttcccattataataactggttctgaggatggtactgttcgtatatggcatgctaccaca
tatcgccttgagaacacgctgaattatggtcttgaaagatttgtgtgggctattggatat
atgaaacgttcacgccgggttgtaattggttatgatgaaggaaccattatggtaaaaatt
ggtcgagaggaacctgtagctagtatggacaatagtggaaaaatcatatgggctaagcac
aatgaaattcagactgttaatattaggagtgttggtgcagattatgaggttactgatgga
gaaagattacctttggcagtgaaagagttggggacgtgtgatctttatccacaaagtcta
aagcataatcccaatgggaggtttgttgttgtttgtggagatggtgaatacatcatatat
acagctttggcatggagaaataggtcatttggctcagcattggagtttgtttggtcgtcg
gatggtgaatatgctgtcagagaaagtacatcaaagataaaaatctttagcaaaaatttt
caggaaaagagaagtatccggccaacattttctgctgagcgtatatatgggggaacttca
ttagcgatgtgctcaaatgattttatttgtttttatgactgggctgagtgcaggttaatt
agacggattgatgttactgtcaaaaacctttactgggctgatagtggtgatttagtggca
attgccagtgatgcatcattctacataataaagtacaatcgtgatgtagtttctgcacat
ttagatagtggaaaaccagtagatgaacaaggtgttgaggatgcctttgagcttctttat
gaaataaatgaacgagtcagaactggactatgggttggggactgttttatttataacaac
tcttcctggcgacttaattactgtgtcggtggtgaggtaacaacaatgtttcatttggac
cggcctatgtacttgttgggatatttagctaatcaaagtagggtgtatctaattgacaaa
gagtttaatgttgtgggatacaccttacttcttagtttgattgagtacaagactcttgtg
atgcgtggtgacctggaacgagccaatgaaattttgccttcaattcctaaggagcaccat
aatagtgtggctcgtttcttggaatcacggggaatgatagaggatgcattggaagtagct
acagaccctgactacagatttgagctagccatacagcttggtaaacttgatgttgcaaag
gaaattgccacaggatcacagactgaatccaaatggaagcagttaggtgaattagccatg
tcaactggaatgttagagatggcagaggactgtttaaagagtgcaatggacttgagtggc
ttgttgctactctactcttctttaggagatgcagaagggatgtcaaaacttgcatctctt
gctaaagagcaaggaaaaaacaatgttgccttcctttgcctatttatgttgggtaaattg
gaagagtgcttacaacttttggttgacagcaatcggatacctgaggctgctttgatggca
cggtcttaccttccaagcaaggttccagagatagttgcaatttggagaaaagacctgaat
aaggttaatctgaaagctgcagaatctttggctgatcctgaagagtatcctaatttgttt
gaggactggcaagttgctcttgaagttgaatcaaaagttgcagaaacaaggtgtttctat
cctccagcagcagagtatgtaaaatatgctgataaatcacgtgttaaccttgtggaggca
ttcagaaatttgcaagtggatgaagacacaccatttgaaaatggagacttgaatcatgag
gttgaggaacagaacggagatgaagacgggcaagaagaggcgcaagatgaagggcaagaa
gaggctgttgtaatcgatgctgactcaacagatggcgcagtactcgttaatggtagcgag
gctgacgaagagtatgtgcttacaccacatcatgagaaccagtga

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