| Entry |
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| Name |
(RefSeq) regulator of nonsense transcripts 1 homolog
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| KO |
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| Organism |
csin Camellia sinensis (tea plant)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csin00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114280955
03015 mRNA surveillance pathway
114280955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csin03019]
114280955
Enzymes [BR:csin01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114280955
5.6.2.5 RNA 5'-3' helicase
114280955
Messenger RNA biogenesis [BR:csin03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114280955
mRNA cycle factors
Common to processing body (P body) and stress granule
114280955
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1269 aa
MDSQGNNLYETASQPDTGTDAYTFLEFHTQGEDFDYPEFQELSQPIRSSVVWPTPSDSIS
DAADRADRASSDASPVSATSGGGAKGRGGGGGGGSNQAAVDALAAGMSGLNFEETVDDES
YEYSKGDFTEHACRYCGVANPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEV
CLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQ
WCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDATLEDLEKPGVDDE
PQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDVGLNKKRIAYFVFP
KEDNELRLVPGDELRLRYSGDAAHAAWQSVGHVIKLTAQEEVALELRASQGVPVDVNHGF
SVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLP
ELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ
LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL
SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL
IPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPA
LSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNR
TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVD
SFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNG
LLMHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFSGGPGIVPDNFGSVASSSPN
SDRRNSRSRGSYMPSGAPNGTHKPGVHPAGYPMPRVPLPPYHGAHPSQPYAIPTRGAVHG
PVGAVPHVPQPGNRGFGAGRGSAGAPIGSHLPHQQGSQQPIGTLGSTYNFPPLENPNSQP
SVGGPLSQPGFVSNMTVQGPSQTFRDGFSMAGMSQDFLGDDFKSQGSHVPYNVAEFSTQA
SQSGYAVDYVTQGAQAGFPGSFLNQNSQAGYSRFGSGNDFMSQDYMAHGSQGLFTQVGFN
DPSQDDASQSHFGVANANSIQSQGLMSPLYSQPFAHYNTQPINLQATQQQQQQPQQGQSS
QNQKLHYNG |
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| NT seq |
3810 nt +upstreamnt +downstreamnt
atggattctcaggggaacaacctctacgagacggcatcgcagcccgacaccggcactgac
gcttacaccttcctcgaattccacacccagggcgaggacttcgactaccctgaattccaa
gagctctctcagccaattcgctcctcagttgtctggcccacgccctccgattccatctcc
gacgccgccgatcgcgctgacagagcctcctccgatgcttccccggtctccgccacctca
ggcggcggcgccaaagggaggggcggcggcggtggtggagggagtaatcaggctgcggtt
gatgctcttgctgcgggaatgagtggtttgaactttgaagagactgtggatgatgagagt
tacgagtatagtaaaggggattttacggaacatgcttgtaggtactgtggggtggctaac
ccggcttgtgttgtgaggtgtaatgtgccgtcgtgtcgcaaatggttctgtaattcacgc
gggaatacttcgggctcgcatattgttaatcatctggttcgagctaaacacaaggaagtt
tgtcttcataaagatagtcccctgggagaaacaatccttgaatgttacaattgtggttgc
cgaaatgttttccttcttggattcatctctgccaagacagagagtgttgtcgttcttttg
tgcagggagccttgtctcagtgtcaatgcattgaaggatatgaattgggacctgagtcag
tggtgtccccttattgatgatagatgttttttgcagtggctggttaaggtcccatctgaa
caggagcagttgagggcacgccaaatcagtgctcagcaaataaataaagttgaagaactt
tggaagaccaatccggatgctaccctggaagatcttgagaagcctggtgtggatgatgaa
cctcaacccgttgccttgaagtacgaagatgcatatcagtatcagaatgttttcgccccg
cttatcaagcttgaagctgactacgataaaatgatgaaagaatctcaaagcaaagacaat
gtcacgatacggtgggatgttggtctcaacaagaagcgcattgcatattttgtttttcca
aaggaagataatgagttgcgtcttgtacctggtgatgagttgcggctacgctattcagga
gatgcagctcatgcggcttggcagtcagtagggcatgtgataaaactaactgcacaagag
gaggtggctcttgagcttcgtgccagtcagggagttcctgttgatgtcaaccatggtttt
agtgtggattttgtgtggaagagcacaagttttgatcggatgcagggggcaatgaaaaat
tttgcagtggatgaaacaagtgttagtgggtacatttatcatcacttgttgggccatgaa
gttgaggttcagatggtccgtaatacattgcctcgtcgttttggtgcgcctggcctacca
gagcttaatgcatctcaagtttttgctgtaaaaagcgtccttcagaagccaataagttta
attcaaggtccacctggcacagggaaaactgtgacttctgcagcaattgtatatcatatg
gccaaacaaggccagggccaggttttggtttgtgctccaagtaatgtggccgttgaccag
ctagctgaaaagatcagtgcaacaggattgaaggttgttaggctctgtgcaaaatcaagg
gaagctgtaagttctcctgtggagcatttaactcttcactatcaggttcggcatcttgac
acatctgagaagagtgaacttcacaagttacagcaactgaaagatgaacaaggagaatta
tccagcagtgatgagaagaaatataaagctctgaagcgagcaacagagagggagatatct
cagagtgctgatgtcatttgttgcacatgtgtaggtgctggcgatcctcgattggctaat
tttagatttcgccaggtccttattgatgaatctactcaagcaactgagcctgagtgtctt
attcccttggttcttggcgtgaagcaggttgttctcgttggtgaccattgtcagcttggt
ccagtcataatgtgcaagaaagcagctcgtgctgggttagcccagtctctatttgaacgc
cttgtgctacttggtgtgaaaccaattagattgcaggttcaatatcgtatgcacccagcc
ctatcagaattcccttctaacagcttttacgaaggtacacttcaaaatggggtgaccatt
aacgaaaggcaatcaacaggcattgattttccttggcctgtgccaaatcgtccaatgttc
ttttatgttcagatgggacaagaggagataagtgctagtggaacatcctatctaaaccga
acagaggctgcaaatgttgaaaaaatagtgactacatttttaaggagtggtgtggttcct
agtcagattggggttataacaccatatgagggacaacgagcatatattgtgaactatatg
tcaagaaatggtgctctcagacaacaactttacaaggaaatagaggttgctagtgtagat
tcattccaaggaagggagaaagattacattattttgtcctgtgtaagaagtaatgaacat
cagggcattggattccttaatgatccacggaggcttaatgttgcacttactcgtgcccgt
tatggtattgtcatcttggggaaccctaaagttctaagcaaacagccgctgtggaatggt
ttattgatgcactacaaggagcacgaatgcttggtggaagggcctctgaataacttaaag
cagagtatggttcaatttcaaaagcccaaaaagatttacaacgaccgcagacttttcttc
agtggcggacctggaatcgtgcctgataattttggctctgttgcctcgtcaagtccaaat
tctgatcggagaaacagccgttcgaggggttcttatatgccatctggtgcacccaatggt
acccataagcctggggtacatcctgctggttatccgatgcctcgggttcctcttccacca
tatcacggggcccacccttcgcaaccatatgctattccaactcgcggagctgttcatgga
cctgttggagctgttcctcatgttcctcaacctggaaaccgtggttttggggctggtcgt
ggcagtgctggtgctcctattggcagtcatcttccacaccagcaaggctcccagcaacct
attggaactcttggatccacttacaactttcctcctctggagaatccaaacagccagcca
tctgttggtggaccgttatctcaacctggatttgtttctaatatgacagttcaaggacca
agccaaacatttcgtgatggtttctctatggcgggcatgtctcaggatttcttgggtgac
gatttcaaaagccagggatcacatgttccatataatgttgccgaattctccacacaggct
tcacagagtgggtatgctgttgattatgttacacaaggagcgcaggctgggttcccagga
agctttctaaaccagaattctcaggctggatattctcgctttggttcaggaaatgatttc
atgtctcaggattacatggctcatgggtcccagggtctgtttacacaagttggattcaat
gacccatcccaagacgatgcttcccagagccacttcggtgtggccaatgccaactcaatt
cagtctcagggtttgatgagtcctctctactcccagccctttgcccactacaatacacag
ccaataaacttgcaagctacacaacagcagcagcagcagccgcagcagggccagagctcc
caaaatcagaaacttcactacaacggttga |
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