Camellia sinensis (tea plant): 114281563
Help
Entry
114281563 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome B-like
KO
K12121
phytochrome B
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114281563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
114281563
NCBI-ProteinID:
XP_028079860
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MSSGNREVHAHHHQGQAQAQAQSSGTSNVRDSVSKAIAQYTVDARLHAVFEQSGVSGKSF
DYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMIAVDESTFQVIAYSENAQEMLGL
TPQSVPSLEKPEILTIGTDVRTLCTPSSAILLEKAFGAREITLLNPIWIHSKNSGKPFYA
ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDSKLLCDTVVES
VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM
IVDCHATSVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSKASLAMAVIINGNDDE
AVGGRSSMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLR
TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYRGKYYPLGVTPTEAQIKDIVEWL
LAFHGDSTGLSTDSLGDAGYPGAASLGDAVCGMAVAYITSMDFLFWFRSHTAKEIKWGGA
KHQPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEGSNS
KAVVHAPLGDLELQGMDELSSVAREMVRLIETATAPIFAVDVDGQINGWNAKVAELTGLS
VEEAMGKSLVHDLVYKESEETVDKLLYNALRGDEDKNVEIKLKTFGSEQHKKAVFVVVNA
CSSKDHTNKIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIIHSPNPLIPPIFASDENTCC
SEWNTAMEKLTGWTRGNIIGKMLVGEIFGSCCRLKGPDAKTKFMIVLHNAIGGQETDKFP
FAFFDRNGKYVQALLTANKRVNMNGQIIGAFCFLQIPSPELQQALKVQRQQEKKCFVRMK
ELAYICQEIKNPLSGIRFTNLLLEATDLNDNQKQFLETSAACEKQMLKIIRDVDLEIIDG
GSLELEKAEFLVGSVIDAVVSQVMILLXSRGLQLIRDIPEEIKTLTVYGDQLRIQQVLAD
CLLNMVRYAPSPEGWVEIHVRPRLKQISDDITILHIEFRIVCPGEGLPPELVQDMFHSSR
WMTQEGLGLSMCRKILKLMNSEVQYIRESERCYFLIILELPMPKQDSKSVD
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggaaacagagaagtgcatgctcatcaccaccaaggtcaagctcaagctcaa
gctcagtcttcaggtacaagcaatgttagagactctgtaagcaaagccattgctcaatac
actgtcgatgctcgccttcacgccgtgtttgaacagtccggtgtgtctggtaagtcgttt
gattactcacaatctgttagaacaactacacaatctgtaccagaacaacaaatcacagct
tatttgtcgaaaattcagagaggtgggcatattcagccctttggttgtatgattgctgtt
gatgaatccactttccaagtcattgcttacagcgaaaatgcccaagaaatgctgggtctc
accccacaatcggttccgagtcttgaaaaaccggagatactcacaattgggaccgatgtg
agaacactttgtaccccttcaagtgcaattttgcttgaaaaagcatttggggcgcgtgaa
atcacgctgttgaacccaatttggattcattctaagaattcggggaaacccttttacgcg
attttgcataggattgatgttggaattgtgattgatttggaacctgctagaacagaggac
cctgccctgtctattgctggggctgtgcagtcccagaagctcgcagtgcgagcgatttcg
catttgcaatcgcttcccggtggggatagtaagctgttgtgtgatacagtggttgagagt
gtgagagagttaactggttatgacagggttatggtgtataaatttcatgaggatgagcat
ggtgaggttgtggctgagagtaagaggccggatttggaaccttattttgggttacactat
cccgccactgacattcctcaggcatcgagatttttgttcaaacaaaaccgggttaggatg
attgtggattgccatgccacatcagttcgagtaattcaagacgaagcgcttatgcagcct
ttgtgtctagttggttcaacgcttagggctcctcacggttgccatgcccagtacatggct
aacatgggttcaaaagcctctttagccatggcggttataattaatggaaatgatgatgaa
gctgttgggggacgaagctcgatgaggctctggggtctggttgtttgccatcacacttct
gctcggtctattcccttccctctccgttacgcctgtgagtttctaatgcaggcctttgga
ctccaattgaacatggaattgcaattggcttctcagttgttagagaaacatgttttaaga
acccaaaccctgttgtgtgacatgcttcttcgtgactcgcctacagggattgttactcag
agccctagtataatggaccttgtgaagtgtgacggggctgcactctactaccgagggaag
tactatccgttaggcgtgactcccactgaagcccaaataaaggacatcgtggagtggttg
ttagccttccatggggactcaactggtttgagcaccgacagtttgggtgatgctgggtac
cctggtgcagcttcgcttggtgatgcagtgtgcggaatggctgttgcttatatcacttcg
atggatttcttgttctggttccggtcccacacagcaaaagagatcaagtggggtggtgca
aaacatcagccggaggataaagatgatgggcagagaatgcatccacgttcttccttcaag
gcatttctcgaagtggttaagagccgcagtttgccttgggagaatgcggaaatggatgca
attcattctttgcagctaattctgcgagactcgtttaaggatgctgagggaagcaactct
aaggctgttgtgcatgccccacttggggatttggagttgcaagggatggatgagctcagc
tccgttgcacgagaaatggttagattgatagagactgcaactgctcccatatttgctgtg
gacgttgatggtcagataaatggttggaatgctaaggtcgcagagttgacaggattatcg
gttgaggaagctatgggaaaatctttggttcatgatcttgtttataaggaatcggaagaa
actgttgacaagcttttatataatgctttgagaggtgacgaagataagaatgtagaaatt
aaattgaagacatttggctctgaacaacataagaaggctgtttttgtggtggtaaatgct
tgctctagcaaggatcacacaaacaaaatagttggtgtatgctttgtcggtcaagatgtt
acgggtcagaaagtggtaatggacaagttcattcacatacaaggtgattacaaggctatt
atacatagtcccaaccctttgatcccacctatatttgcttcggatgagaatacatgttgc
tctgagtggaacaccgccatggaaaagcttaccgggtggaccagagggaacatcattggg
aagatgttggttggagagatttttggcagttgctgtcggctcaagggcccagatgctaag
acaaaattcatgatcgtgttgcacaatgcgatcggagggcaggaaacagacaagttccca
tttgccttttttgaccggaatggaaaatatgtgcaagctctcttaacggcaaacaaaagg
gttaatatgaatggccagattattggagccttttgtttcctccaaattccaagtcctgaa
ttgcagcaagctctgaaagtccagagacaacaggaaaagaaatgctttgtgaggatgaaa
gagttggcttacatttgccaggaaataaagaatccgttaagtggtatacgctttactaat
ttgcttttggaggctacagacttgaacgataatcagaagcagtttcttgagacaagtgct
gcttgtgagaagcagatgttgaagattataagggatgttgatctggagatcattgacggc
ggttcgttggagcttgagaaggctgaattcttagttgggagtgtgatagacgctgttgtt
agccaagtaatgatattacttnattcaagaggtctacaattgatccgcgatattccagag
gaaatcaaaaccttgactgtttatggtgatcaactgagaattcaacaggtcttagctgat
tgcttattgaatatggtgcgttatgcaccttctccagaaggttgggtagagattcatgtt
cgaccaagactaaagcaaatttctgatgatataactattctacatattgaattcaggatt
gtctgccccggtgaaggtcttccacctgaactcgttcaagacatgtttcatagtagtcga
tggatgactcaagaaggcctagggctaagcatgtgcagaaagattttaaagctcatgaac
agtgaagtccaatacattagagagtcggaaagatgctattttctaataatcctcgaactt
cccatgcctaagcaagactccaagagcgttgactag
DBGET
integrated database retrieval system
