| Entry |
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| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1
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| KO |
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| Organism |
csin Camellia sinensis (tea plant)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csin00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114281805
09124 Replication and repair
03420 Nucleotide excision repair
114281805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csin03021]
114281805
03400 DNA repair and recombination proteins [BR:csin03400]
114281805
Enzymes [BR:csin01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114281805
Transcription machinery [BR:csin03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114281805
DNA repair and recombination proteins [BR:csin03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114281805
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
768 aa
MGHGEKGRHSKKHKSSSKEDHRPTVVEDDDSYYVEDLDDDYRDGDREGKKRDFSKLELKP
DHTNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPENMHEYNLTPHSLYAAVSV
GLETETIISVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYLVESPFPEVLKRLL
KDEVIARARISSEGAHGSDGFTISKSVGEIENGHNELLNEAELAAVAEEKETHSFEIDPA
QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA
RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFT
SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR
KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE
YAMKLRKPMIYGATSHMERTKILEAFKLSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA
GSRRQEAQRLGRILRAKGRIQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
YSFKVITSLPPPDSGPDLSYHRLEDQIALLGKVLSAGDDAVGLELLEEDADDIALQKARR
AAGSMSAMSGANGMVYMEYNTGRNKQGQMKSKPKDPTKRHVLFRKRFG |
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| NT seq |
2307 nt +upstreamnt +downstreamnt
atgggacacggtgaaaaaggtcgccatagcaaaaagcacaaatcttcttccaaggaggat
cataggcccacagttgtagaagacgatgactcctattatgtcgaggatttagatgatgat
tatcgtgatggtgatagggaaggaaaaaagagagattttagcaagctagaacttaaacca
gatcacactaaccggccgttatgggcttgtgccgatggtcggattttcctcgaaactttc
tcccctctctacaaacaagcttatgattttcttatcgccattgccgagcctgtttgcagg
ccagagaacatgcatgaatacaacttgacccctcactccttgtatgccgcggtatcagtt
ggtctcgaaactgaaaccattatatctgttttgagtaagttgtcaaagaccaagctcccc
aaagagatgattgatttcattcatgcttcaactgccaattatggcaaagtgaagcttgta
cttaagaagaaccggtaccttgtcgaatctccatttccagaggtattgaagagattgctt
aaggatgaagttatagctcgagcaaggatttcttctgagggagcgcatggaagtgatgga
tttacaattagcaaatcagtgggtgaaatagaaaatgggcacaacgagttactaaatgaa
gcggaattggcagctgtagctgaagaaaaagaaactcattcctttgaaattgaccctgct
caggttgaaaatgtaaagcagcggtgtttgccaaatgctttaaattatcctatgctggag
gagtatgacttcagaaatgatactgtcaatcctgaccttgatatggagttgaagcctcaa
gcacaacctcggccttatcaggaaaaaagtcttagcaagatgtttggaaatggtagagcg
agatctggcattattgtattaccttgtggtgcagggaagtctctagttggtgtctctgca
gcctgccgaataaagaagagctgcctttgtttagcgacaaatgctgtttctgtggatcaa
tgggcatttcagtttaagttgtggtcaaccatacgagatgagcagatatgtcggttcact
tctgatagcaaagaaagattccgtggtaatgctggggtggttgtgacaacttataacatg
gttgcatttggtggtaaacggtctgaagaatctgaaaagattattgaagaaataagaaat
agagaatggggattgcttctcatggacgaggtgcatgtggttccggctcacatgtttaga
aaggtcatcagcataaccaagtcccactgcaaacttgggcttactgcaacacttgtgaga
gaggacgaaaggatcacagatttgaactttcttattggccccaaattgtatgaagcaaat
tggttggatttagttaaaggaggatttattgcaaatgttcagtgtgctgaagtttggtgt
cccatgacaaaggaatttttcgctgaatatctgaagaaagaaaattctaagaagaaacag
gcactttatgtgatgaaccctaataagttccgggcctgtgagtttcttattcggtttcat
gaacaacagcgtggtgataagataattgtttttgctgacaatctttttgcgctgacggag
tatgcaatgaagctccggaaacctatgatctatggtgccaccagccatatggaaaggaca
aagattcttgaggctttcaaacttagtcgggatgtaaatactattttcctctcaaaggtt
ggtgataattcgatagatattcctgaggccaatgtgataattcaaatttcctcacatgcg
ggttcaagacgtcaagaagcccaacgacttggtcgtattcttagggcaaaggggcgtatt
caagacagattggccgggggtaaagaggagtataatgcattcttctattcacttgtatct
acagatacacaggaaatgtactactcgactaaaaggcagcaattcttaatcgatcaaggt
tatagctttaaggtaattacgagcttgcctccacctgattcgggacctgatttgagttac
catcgccttgaggatcaaatcgccctgctgggaaaggtattgagtgctggtgatgatgca
gttggattagagctattagaagaagatgcagatgacatagcccttcaaaaagcacgtcgc
gctgctggatctatgagtgccatgtcgggagcaaatggaatggtttacatggaatacaat
actggacggaataagcagggtcagatgaagagtaaacctaaggatccaaccaagagacat
gttttatttaggaaacgctttggctaa |
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