Camellia sinensis (tea plant): 114282321
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Entry
114282321 CDS
T07364
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114282321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114282321
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114282321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
114282321
NCBI-ProteinID:
XP_028080773
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MQRQKSILSFLQRPSPENQKNGGDALEGRRVPHFPAKQHNKNTVVANQATVSSTLDSSVE
IRGTDTPPEKVPRQIFRTSFAANENSERPSLFSSIKHKFVRVDDKEKSCDASFEFLGNQV
NGGSINVCPITSKSSNLEALLCEVAPSEHVGKGNIHNSNGTDRRGDNGCPLVIEDDDDDI
LGPETPGMRPLVPRLKRIQEDSCNFKDRSDCSLLDSSKRIKKDSEAGNRNLAQLSETTSK
FEWLDPSRIRDANGRRPGDTLYDKRTLYIPPDALKKMSASQKQYWNVKSQYMDVMIFFKV
GKFYELYELDAEIGHKELDWKITMSGVGKCRQVGISESGIDEAVQKLIARGYKVGRMEQL
ETSEQARARGAASVIQRKLVHVFTPSTLIDDNIGPDSVHLLAIKEGNCELGSGSTTYGFA
FVDCAALKFWVGSISDDTSCAALGALLMQVSPKEVIYESHGLSREAQKALKKYTLTGSTA
SQLTPVQPAINLVNASEVRNLIQLKGYFKGSSNTWDQTFDGVMHHDLGLCALGGLISHLS
RLMLDDVLRNGDIRPYQVYKGCLRMDGQTLVNLEIFGNNADGGPLGTLNNYLNNCLTSSG
KRLLKNWICHPLKDVEQINCRLNVVEELMAHSEFMLLIAQYLRKLPDLERLLGRVKASFQ
SSASLVLPLIGRKVLKQRVKKFGALVKGLRVGMDLLLLLQNEGHMILSLSKVLKLPLLNG
NDGIDKFLAQFEAAIESDFPNYQDHNVMDSDADILSILIELFMEKVVEWAQVCQAIDCID
VLRSFAVTASSACGAMSKPVILPLSKSTGLCQVTRGPILKIKGLWHPYALGENGELPVPN
DVYLGEDTDGHHPRSLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCEMCVLSLADIIF
TRLGSTDRIMTGESTFFIECTETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRH
LVEKVNCRLLFATHYHPLTKEFAHHPHVILQHMACTFKSKSENSSEGVEDLVFLYRLTFG
ACPESYGMQVALMAGIPKQVVEAASRAGQVMKESIGESFKSSERRSEFSTLHEEWLKTLL
AISKTEEGNFDDNDAFDTLFCLWHEVKSSYQMGK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaagtctatactgtccttccttcagagaccttcgccggaaaaccagaaa
aacggcggagacgcactcgaaggccggcgagtccctcattttccggcgaagcaacacaac
aaaaacaccgtagtagccaatcaagctaccgtttcgtcaacattggactcctctgttgaa
atccgaggaactgacactccgccggagaaggtgccacgtcagattttccggacgagcttc
gcggcaaatgaaaacagcgagaggccttctctgttctccagcattaagcacaagttcgtg
agggtcgatgataaggaaaagtcctgtgatgcgtcttttgaatttctagggaaccaagtg
aatggtggttccatcaatgtttgcccaattactagtaaatcaagtaacttggaagcattg
ctttgtgaagttgctccttctgaacatgttgggaagggaaatatacacaattctaatgga
acagatcgtcgaggggataatgggtgtccattggttatagaagatgatgatgatgatatt
cttgggccagaaacaccaggtatgcggcctcttgttccgcgtttgaagcgaattcaagag
gacagttgcaactttaaggatagaagtgattgctccttgctggattcgagcaaacgaatt
aaaaaagattcagaggccggaaatagaaatcttgcacagctgtctgaaacaactagtaag
tttgaatggcttgatccatctcggatcagggatgctaatggaagaaggcccggtgacact
ctatatgacaagaggacactctatatacctcccgatgctttgaaaaaaatgtcggcatct
caaaagcagtattggaatgttaagtctcagtatatggacgtaatgattttcttcaaagtg
ggaaaattctatgagctctatgaactagatgctgaaattggccataaggagcttgattgg
aaaattacaatgagtggtgtgggaaaatgtcgacaggttggcatctctgagagtgggatt
gatgaggctgttcagaagttgattgctcgtgggtacaaagttggccgaatggagcagttg
gaaacgtctgaacaagcaagagccagaggtgctgcatctgtgatccaaagaaaattagtt
cacgtattcacaccatcaaccttaattgatgataacattgggcctgattctgttcatctt
ctcgctataaaagagggtaactgtgaactaggcagtggttcaactacatatggctttgct
tttgttgactgtgctgctttaaaattttgggttggttctattagcgatgacacttcctgt
gcagcattgggggcattgttgatgcaagtgtcgcctaaggaagttatatatgaaagtcac
gggctgtccagagaagctcaaaaagcactcaaaaagtacacattaacaggatccactgca
tcacaactgactccagtacagccagccattaatttggtgaatgcttctgaagttagaaat
ctaattcagttgaagggatacttcaaagggtctagtaatacatgggatcagacttttgat
ggtgttatgcaccatgatcttggattatgtgctcttggtggacttattagtcatctatcc
aggttgatgttagatgatgttttgcgtaatggagatattcgaccataccaagtctataag
ggttgccttagaatggatgggcagacactggttaatcttgagatttttggtaataatgct
gatggtggtccattaggtacacttaacaattatcttaataactgtttgacatcatctggt
aagcggcttttaaagaactggatctgtcatcctctgaaagatgtagagcaaatcaactgt
aggcttaatgttgttgaggagctaatggcacattcagaatttatgttactcattgctcaa
tatcttcgtaagcttccagacttggaaaggttgcttggacgggttaaggctagctttcag
tcatctgcttcacttgtactgcctttgattggcagaaaagttttgaagcagcgagtaaaa
aagtttggggctcttgttaaaggcctacgtgttggaatggatttgttgttacttttgcag
aatgaggggcacatgatcttatcattatcgaaagttctaaagcttccattgctaaatggt
aatgatgggattgataaattccttgctcaatttgaagcagctatagaaagtgacttcccc
aactaccaggaccataatgtgatggactcagatgctgatatactctcaattctgattgag
ttgtttatggagaaagttgttgaatgggctcaagtctgccaagccatagattgtattgat
gtactaagatcttttgcagtcactgcaagttctgcatgtggggctatgtcgaaacctgtc
attttacctctttctaaatccactggtttatgccaagtaaccagaggaccaattcttaaa
attaaaggactgtggcatccttatgcccttggagagaatggcgaactacccgttccgaat
gatgtatacctcggagaggatacagatggccatcacccccgatctttactattgactgga
ccaaatatgggtggaaaatccacccttttacgtgctacatgtctagctgttatactggca
cagctgggctcttatgtgccttgtgagatgtgtgttctttcccttgcggatatcattttc
acgaggcttggttccactgaccgaatcatgactggcgagagtactttcttcattgagtgc
acagaaacagcatcagttcttcaaaatgccacacaagattctctggttcttcttgatgaa
ttaggtcgaggaacaagcacctttgatggatatgctatcgcatatgctgtatttcgtcat
cttgttgagaaggtcaactgtcggttactctttgcgacacattatcacccactgacaaag
gagtttgctcatcatccacatgttatactacaacacatggcctgcactttcaagtcaaaa
tctgagaactcatctgaaggagttgaggatttagttttcctgtaccggctgacctttgga
gcatgcccagagagctatggaatgcaagtggcactcatggccgggatcccaaaacaggtg
gttgaagctgcatcaagagctggacaagtgatgaaagaatcgattggggaaagtttcaag
tcgagtgagcggaggtctgagttttcgactctacatgaagagtggttgaagaccctctta
gctatctcaaagactgaagaaggcaattttgatgataatgatgcatttgacacattgttt
tgcttgtggcatgaggtgaaaagctcatatcaaatgggtaaataa
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