Camellia sinensis (tea plant): 114282541
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Entry
114282541 CDS
T07364
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114282541
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114282541
Spliceosome [BR:
csin03041
]
Complex C
Other components
Complex C specific factors
114282541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_19
AAA_30
ResIII
AAA_7
Cas3-like_C_2
nSTAND3
T2SSE
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
114282541
NCBI-ProteinID:
XP_028081046
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAQFWKPGTERPPLLDDEEGGILLYSASRSSSSGYNHVSIEKQRQRLPVFRYRTSILYLV
ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK
LGEEVGYTIRFEDLTNRDLTRIKFLTDGVLLREMMEDPLLTKYSVIMVDEAHERSISTDI
LLGLLKKIQRRRPELRLIISSATIEAKSIAAFFHNSKKRRGLEGEERGPKTEPAILSVEG
RGFNVQVFYAEEPVPDYIQAIVSTVMSIHDQEPMGDILVFLTGQDDIDTAVQLLTEEAQN
NGKPSSGLVVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGF
SKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEHFVKEMSAEGIPE
MQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPTGF
QIAEIPLDPMISKMILASNQLGCSEEIITIAAVLSIQSIWISARGQQKQLDEAKLRFAAA
EGDHVTFLNVYKGFLQSGKSSKWCNKNFVNYHAMRKVIEIREQLRRIALRIGMVLKSCES
DMQAVRKAVTAGFFANACRLEAFSHSGMYKTLRSSQEVYIHPSSVLFRVNPKWVIYHSIV
STDRQYMRNVISLDPSWLLEAAPHFYQHQQPNSIPH
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattttggaaaccaggtaccgagagacctccccttctcgacgatgaagaaggc
ggcattcttctctactctgcctctcgctcctcctcatctggatacaaccatgttagcata
gagaagcaaaggcagagacttccggtgttcaggtaccgaacttccattctctatctggtg
gagactcatgccaccaccattatcgttggtgaaacaggaagtggcaaaactacccaaatc
cctcagtacctcaaagaagcaggttgggctgatggtggacgtgtgattgcatgcactcag
ccaagacgattagctgttcaggcagtggcttcaagggtggctgaagagatgggtgtcaag
cttggggaggaagttggttatacaattcgatttgaagatctcacgaatagagacttaact
aggattaaatttctcactgatggggtgttactgagggagatgatggaagaccccctcctg
accaagtacagtgtcataatggttgatgaagctcatgagcggtctatttcaacggatatc
ttgttgggtctcttgaagaagatccaaaggcgtcgacctgagctgcgtctgatcatctca
tctgctacaattgaagcaaaatcaattgctgcttttttccataacagcaaaaaacgtcga
ggattggaaggtgaagagcgtggaccaaagacagagcctgccattctgtcagttgagggt
agaggatttaatgtacaagtcttttatgctgaggaacctgttcctgactatattcaagct
atcgtttcaacagtaatgtcaattcatgatcaggaaccaatgggtgatatccttgtattc
ctaactggtcaagatgatatcgataccgctgtccagttgcttacggaagaagctcaaaat
aatggaaagccttcttcaggattggttgttctgcctttatattcaggtctctcacgtgca
gaccaggacctcgtgttttcccccactcctagagggaagaggaaagtggtgatatcaaca
aatattgcggagacatcattgactttggagggtgttgtctatgtagttgacagtgggttc
tcgaaacagcgattctataacccgatttcagatatcgaaaatttggttgtagcaccgata
tccaaggcatctgctagacaaagggctggtagagctggaagagtacgacctggaaagtgt
tacaggctgtatacagaagagcattttgtcaaagaaatgtctgctgaggggataccagag
atgcagagatcaaatcttgtttcttgtgtgattcagttaaaggccttgggtatagacaat
atcttaggctttgattggcctgcatctccgtcacctgaagcaatgatcagagcacttgaa
gtactttattcactcggagtccttgatgatgatgccaaacttacctcacctactggattc
caaattgcagagataccattagatccaatgatctcaaaaatgatcttagcttcgaatcaa
ttgggctgttctgaggaaatcatcactatagctgctgttctttccattcagtctatctgg
atttctgctagggggcaacaaaagcagctggatgaagccaagctaagatttgctgctgct
gagggtgatcatgtgacctttctaaatgtctacaaaggatttcttcagtctggaaaatct
tcaaaatggtgcaataagaactttgtaaactaccatgccatgcgaaaggttattgaaatt
agagaacaactcagaagaatagcactacgaatcggcatggtcttaaaatcttgtgaaagt
gatatgcaggcggtaagaaaggcagttactgctggattttttgctaacgcttgtcgttta
gaagcattcagccacagtggtatgtacaagactctcagaagttctcaagaagtttatatt
cacccctcatctgtgttattcagagttaatccaaagtgggttatataccactcaattgtc
tcaactgatcgacaatacatgcgcaatgtcatctctttagatccttcttggctgttagaa
gctgctccacatttttaccagcaccagcaacccaattctattcctcattga
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