KEGG   Camellia sinensis (tea plant): 114283077
Entry
114283077         CDS       T07364                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114283077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csin03021]
    114283077
Enzymes [BR:csin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114283077
Transcription machinery [BR:csin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114283077
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 114283077
NCBI-ProteinID: XP_028081712
LinkDB
Position
Unknown
AA seq 1220 aa
MEDPGASSKDDMKLNVEDDIMDLDDFFENLVGTSSKVEKSSNGDVHMGLDDDDFMDPTAI
QDMGEIFLKNFCKKASMSFFEQYGLISHQINSYNDFIKNGVQNVFDSIGEITVEPGYDPS
KKGENEWRHASVKFGKVTLERPQFWTGEKFSADSGKEYLNLLPRHARLQNMTYSSRMKVQ
ILLQVYSPKLVRSDKFKTGKEQYLDKELISEDSRDVIVGRIPVMLKSDLCWMNGVEKSDC
DFDHGGYFLVKGAEKTFIAQEQICLKRLWVSNNPTWAVSYRHVLRRKRVFIKLVDASKDK
QISGGEKVLSVYFSGTEFPIWILFFALGVSSDREVVNLIDCGTEDSRIVNILVASIHDAD
ECAGFRRGGKALSHVEGVLKRSNYPPGESIEEFFSNYLFPNLSGFRRKARFLGYMVNCLL
QAYTGRRKVDNRDDFRNKRLELAGELLERELRVHIKHAEKRMVKALQRDLYGDRQLQQIE
HYLDASIITNGLCRAFTTGAWTHPYKRMERISGVVAMLRRTNPLQSISDMRKTRQQVQYT
GKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLVSANVQEPFLDKLLDCGMEGL
ADDTSTLLSGKYKVLVDGDWAGVCEDSSWFVAQLRAMRRRKEVPHQVEIKRDEKHREVRI
FSDPGRILRPLLVVGNLRKVKALKGGNYSFQTLLDNGIIELIGTEEEEDCRTAWGIKYLL
MESEGKSPVKYTHCELDMSFLLGLSCAIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPN
IRVDTNAHQLYYPQRPLFRTMLSDSLGKPGYPLGHNGVVPRPEYFNGQCAIVAVNVHLGY
NQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEALGKKPKYEDTVNFGKMQSKIGRVDS
LDDDGFPFIGANLQSGDIVIGKCAESGVDHSIKLKHTERGMVQKVVLSANDDGKNFAVVS
LRQVRTPCLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL
EAALGKGIACGGSLRYATPFSTISIDAITDQLHRAGFSRWGNEIVYKGRTGEMKHSLVFM
APTCYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL
HERLFTLSDSSQMHICRKCKNIANVIQRPVPGGRKIRGPYCRFCESVEEIVRVNVPYGAK
LLCQELFSMGISLKFDTEVF
NT seq 3663 nt   +upstreamnt  +downstreamnt
atggaagacccaggagcaagtagtaaggatgatatgaaattgaatgtagaggatgatatt
atggacttagatgactttttcgaaaacctagtaggaacgagtagtaaggttgagaagtca
tcaaatggagacgtgcacatgggtttagacgatgatgatttcatggatccaacagcaata
caggatatgggagaaatttttctgaagaatttttgtaagaaggcatcgatgtcatttttt
gaacaatatggactgatcagtcaccaaatcaactcttacaatgatttcataaaaaatgga
gtccagaatgtgttcgattccattggtgagattacagttgaacctgggtacgatccatcc
aagaagggggaaaatgaatggagacatgcttcagtaaagtttgggaaggtcacccttgag
cggccacagttttggacaggtgagaagttttcagctgatagcggtaaagagtacctgaat
ttgttgcccagacatgctcgccttcagaatatgacatattcgtcccgaatgaaagttcag
attctccttcaggtatattctccgaagcttgttagaagtgacaaatttaaaactggcaaa
gaacaatatcttgataaggaactgataagtgaagatagcagggatgtaattgttggccga
atccctgtaatgctcaagtctgatttgtgctggatgaacggggttgagaaaagcgattgt
gactttgaccatggaggctatttcctagtcaagggtgctgagaagacatttattgcacag
gagcaaatctgcctgaaaaggctttgggtgtctaataatccaacttgggctgtttcatac
cgtcatgttttaagaaggaaaagagtttttataaaactagtggacgcttctaaagataaa
cagattagtggtggagaaaaagtcctttcagtatatttctctggaacagagtttccaatc
tggattttgttttttgcccttggtgtatcttccgacagggaagtggttaatttgattgac
tgtggtactgaagattccagaattgtcaatatacttgttgcatcaattcatgatgctgat
gagtgtgctggatttcgtagaggggggaaagctcttagtcatgtggagggagttctgaaa
cgcagcaattatccacctggagaatctattgaagagttctttagcaattatttgttcccc
aatcttagtggcttcaggcgaaaggctcgttttcttggatatatggtcaactgtctcttg
caggcctatacaggccgcagaaaagttgataacagggatgattttagaaacaagaggttg
gaattggctggtgagctacttgaacgagaactgagagtccacattaaacatgctgagaag
cgtatggtgaaggctctgcagagagatctttatggagatcgtcaactgcaacagattgaa
cactatctggatgcatcaatcatcaccaatggtctttgtagggcgtttacaaccggagca
tggacacatccttacaagaggatggaaaggatctctggtgtagtggcaatgcttaggcga
acaaatccattgcagagtatatctgatatgaggaaaacacgtcagcaggttcaatacact
gggaaggttggagatgccagatacccacacccatcacactggggaaagatttgctttctg
tctaccccggatggtgaaaattgtgggcttgtaaaaaatttggccatcacaggactcgtc
agcgcaaatgttcaggaaccttttcttgacaaattgcttgattgtgggatggagggactg
gcagatgatacttcaactttgctttctggaaagtacaaagttttggtggacggggactgg
gctggagtatgtgaagattctagttggtttgttgcacagttaagggctatgcgacgcagg
aaggaagtgccacaccaggttgaaatcaaaagagatgagaagcacagagaagtgaggata
ttttctgatcctggaagaattttacgtcctcttctagttgttggtaacttaaggaaagtt
aaagctctgaaagggggaaattacagctttcaaactcttctggataatggaataattgaa
cttattggaactgaagaagaagaagactgccgaactgcttggggaattaagtacctcttg
atggaatctgagggcaagtcacctgtcaaatacacacactgtgaacttgacatgtcattt
ttattaggtttaagctgtgcaattatcccttttgcaaatcatgaccatgcaaggagggtc
ctctaccagtctgagaagcactctcaacaggctattgggttttccacaacaaatccgaat
atcagagtagataccaatgctcatcagctctactaccctcagaggccacttttccggaca
atgctttctgattctcttggaaaaccaggatatcctcttggtcacaatggagtagtgcca
aggcctgagtacttcaatggccaatgtgctattgtggcagttaatgttcacttggggtac
aatcaagaggattccttggtgatgaatcgggcttcattagagcgtggaatgtttcgatca
gaacatataagaagctacaaagctgaggttgataataaggaagcattaggaaagaagccc
aagtatgaggatactgttaactttggaaagatgcagagcaaaattggacgtgttgacagc
cttgatgatgatggttttccattcattggagcaaatctccagagtggtgatattgtcatt
gggaaatgtgctgaatccggcgtagaccacagtataaaattgaagcacactgaaagggga
atggttcagaaagtcgtgctatctgctaatgatgatggaaaaaactttgctgtagtatct
ttgagacaggttcgaacgccatgtctcggtgacaagttctctagcatgcatgggcagaaa
ggtgtattgggttttctggaatatcaagagaatttccctttcacaattcaagggattgtc
ccggatattgtcataaaccctcatgcatttccttcacgtcagactcctggtcaattgcta
gaggctgccttgggaaagggtattgcatgtggtggttcgctaagatacgccaccccattt
tccactatttctattgatgccataacggatcagcttcatagggctggattttcaagatgg
gggaatgaaatagtgtacaaaggccgaactggtgagatgaaacactctcttgtatttatg
gccccaacatgctaccagcgtctgactcatatgtccgaagacaaagtgaaattccgcaac
actggacctgtccatccgctcaccagacagcccgtggcagacaggaagcgcttcggaggg
atcaaatttggcgagatggagcgtgactgccttatagcccatggtgcagcagccaatctc
catgaacgactcttcacgctcagtgactcctcccaaatgcacatctgccggaaatgtaaa
aacatcgcaaatgttattcagcggccggtgcctggcggtcgtaagattaggggtccgtat
tgccggttttgcgagtctgtggaagagattgtcagagtgaatgtgccctacggagcgaag
ttgctgtgtcaagagcttttctccatgggcatatctctgaagtttgatactgaagtcttt
tga

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