Camellia sinensis (tea plant): 114283175
Help
Entry
114283175 CDS
T07364
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114283175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114283175
03036 Chromosome and associated proteins [BR:
csin03036
]
114283175
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114283175
Coactivators
SAGA/TFTC/STAGA complex
114283175
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114283175
STAGA complex
114283175
TFTC complex
114283175
SAGA complex
114283175
SLIK complex
114283175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
ASA1
PAC11
CFAP251_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_HPS5
LisH_PAC1
LisH
PALB2_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
114283175
NCBI-ProteinID:
XP_028081803
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MDEEEIEKAVIAYLKKKGFKQTELAFQEEQQHHTKNSSSNSSTDPDIAKHLLSFSESDNV
PAQYHDGYSKLRSWTYSSLDLYKHELIRVLYPVFVHCFMDLVAKGHIQEARNFFNSFRED
HEMMHLRDLQKLEGVLSPCHLEEMEFAHSLRQSKVNLKICQYSYELLLQYLHKTQSITML
GVINEHINFQVSPGQPSSISDDEGVTLVGSGQDAANLINQKEIHWGLLEDSLEERLEKAG
SLLSDLEKVDGESKEGDLDESKKRAVEGGKQGASLKKLKKDKVVGATGKAVRIETNTVPA
APRVKSELTLPVMPTEVEHSILEDLRNRVQLSSSALPSVSFYTFINTHNGLNCSSISHDG
SLVAGGFSDSSLKVWDMAKFGQQTGSSILQGENDFATSEHVLGADGGKRSYTLFRGHSGP
VYSASFSPFGDFLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPLGHYFASASH
DRTARIWSVDRIQPLRIMAGHLSDVDCVRWHSNCNYIATGSSDKTVRLWDVQSGECVRIF
IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWTLAFSCEGSL
LASGSADCTVKLWDVTASTKVLKTEENKTGSTNRLRSLKTLPTKSTPVYTLQFSRRNLLF
AAGALSKSV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagagatagagaaagcagtgatagcgtatctgaagaagaagggtttcaag
cagacagagctcgctttccaagaagagcagcaacaccacaccaaaaactcctcttccaac
tcctccaccgaccccgacattgccaaacaccttctctccttctccgaatcagataatgtt
ccagcacagtaccatgatggatacagcaagcttaggtcatggacttacagttcactggat
ttgtacaagcatgagttaatccgtgtcctctatccagtatttgtccattgtttcatggat
cttgtggcaaaaggtcatattcaagaagctcgaaattttttcaatagctttcgtgaagac
catgagatgatgcacttacgggaccttcagaaattggaaggagttctttctccgtgtcat
ctggaggaaatggagtttgctcattctttgaggcagagcaaagtgaaccttaagatatgc
cagtattcttacgagcttctgctgcaatatttacacaagacacaatccattacaatgctt
ggggttattaatgagcatattaactttcaagtttctcctggacaaccaagctcaatttct
gatgatgaaggtgttacacttgttgggagtggccaggatgcagctaatctgataaatcag
aaagaaatacactgggggttacttgaagactctttagaagaaaggttggagaaggcagga
agtttgctttcagatttggagaaggtagacggagaaagtaaggaaggtgacttggatgag
agtaagaagagagcagtggagggagggaagcaaggtgcttctctcaaaaagttgaaaaag
gacaaggtggttggtgcaacagggaaagctgttcgtattgagaccaatactgtgcctgca
gcaccacgtgtaaaatctgagctcactttgccagtaatgccaacagaggttgaacattct
attcttgaagacttacgaaaccgggtacagttgagcagctctgctttgccctcagtcagc
ttctatacatttattaacacacataatggcctaaactgttcatcaatatcccatgatgga
tcattggttgctggtggattctcagactcatcactgaaggtttgggatatggcaaagttt
ggacaacaaactggcagttctattttgcagggtgagaatgattttgctaccagtgagcat
gtacttggggcagatggcgggaaaagatcttacactttattccgaggtcactctgggcct
gtctactcagctagttttagtccttttggggattttcttctatcctcttcatcagattca
acaattcgattgtggagcacaaaactaaatgcaaatcttgtttgctacaagggtcataat
tatcctgtatgggatgttcagtttagtccattaggacattattttgctagtgcttcacat
gatcgaacggcaaggatttggtctgtggacagaatacagcctttaaggataatggcgggg
cacttatccgacgtggattgtgtaaggtggcattcaaactgcaattacattgctacagga
tctagtgacaaaacagttcgattatgggatgtacagagtggggagtgtgttagaattttc
attggtcacaggagtatggttttatctttggctatgtcacctgatggccggtacatggcg
tctggtgatgaagatggcacaattatgatgtgggatctctcaagtggtcgttgtgtcacg
cctttggtgggtcacacctcctgtgtctggactcttgctttcagttgtgaaggctcactt
cttgcatctgggtctgctgattgcactgtaaagttatgggacgttacagcaagcacgaag
gtgctaaaaacagaagaaaacaaaactggaagtacaaacagactcagatcattgaagact
ctacctaccaagtccactccagtttacacattgcagttttctcgaaggaatcttctcttt
gctgctggggctctttcaaaaagtgtataa
DBGET
integrated database retrieval system
