KEGG   Camellia sinensis (tea plant): 114283970
Entry
114283970         CDS       T07364                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03082  ATP-dependent chromatin remodeling
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114283970
   03083 Polycomb repressive complex
    114283970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114283970
Enzymes [BR:csin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114283970
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114283970
   HDAC complexes
    Sin3A-HDAC complex
     114283970
    BRAF-HDAC complex
     114283970
    REST complex
     114283970
    SHIP complex
     114283970
    MiDAC complex
     114283970
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114283970
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114283970
  Chromatin remodeling factors
   NuRD complex
    114283970
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114283970
NCBI-ProteinID: XP_028082675
LinkDB
Position
Unknown
AA seq 498 aa
METGGNSLPSGPDGVKRKVFYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMH
VVKPVLARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGADLDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDDIRVKLLDNLSKLQHAPSVQFQERPPDIELPEADEDQEDEDERWDRDTDMDV
DDDRKHLPGRVKREYLEPKDTEDLKVECAREMDMPFMETACSNASHPGAMSSVDESSQKK
LEQENINKPSDPPYEMNS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggaaacagggggcaattccctgccatctggaccagatggagtgaagagaaaagtgttc
tatttttatgacccggaggttggcaattactattatgggcaaggtcacccaatgaagcca
cacaggattcgtatgacacatgctcttctagctcactatggtttactacaacatatgcat
gttgtaaagcctgttcttgctagagatagggatctttgtaggtttcatgctgatgattat
gttgcatttctgaggagcatcaccccagaaacccagcaggatcaactcaggcagctgaag
aggttcaatgttggtgaagactgccctgtgtttgatggtttgtattctttctgtcagact
tatgctgggggttcagttggtggtgccgtgaagttgaaccatggatcttgtgatattgca
ataaattgggctggtggtctacatcatgcaaagaaatgtgaggcttctggtttctgctat
gtgaatgatattgtcttagcaattttggaacttcttaaagtgcatgagcgtgttttatat
gttgatatcgatattcatcacggtgatggtgtagaggaggctttttatactacagacagg
gttatgactgtttcctttcataaattcggagattatttccctggtacgggtgatgtacgt
gatattggatatggaaaggggaaatattactctctcaatgtcccactagatgatggtatt
gatgatgagagctaccagtccttgtttaagccaataatgggcaaagtgatggaagttttc
aagcctggtgctgtggtcttacaatgtggtgcagactcgttgtctggggatagattaggc
tgttttaatctctcaataaaaggtcatgcagagtgtgtaagatacatgagatcatttaat
gtgcctctactgttgctgggtggaggtggttataccatacgtaacgttgctcgctgctgg
tgctatgagactggagttgcacttggggctgaccttgatgataagatgccacaacatgag
tactatgaatattttggtccggattatactcttcatgttgctccaagtaacatggaaaac
aagaattcacgtcagctactggatgatataagagtaaagcttcttgataatttgtcaaaa
cttcagcatgcaccaagtgtgcagtttcaggaacggcctcctgatattgagctcccagag
gctgatgaggatcaagaggatgaggatgaaaggtgggatcgtgatactgatatggatgtt
gatgatgaccgcaagcatttgccaggcagagtgaagagggaatatctcgagcctaaagac
acggaggatctgaaagtggagtgcgcaagagaaatggatatgccatttatggaaactgca
tgctcaaatgcttcacatccaggagcaatgtcgtccgtagatgaatcatcgcagaaaaag
ctggaacaagaaaacataaacaagccatctgatccgccttatgagatgaattcatag

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