Camellia sinensis (tea plant): 114284738
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Entry
114284738 CDS
T07364
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114284738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114284738
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114284738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Utp12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
CFAP251_N
Beta-prop_WDR3_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_Vps41
BBS1
PQQ_2
NBCH_WD40
PQQ
Motif
Other DBs
NCBI-GeneID:
114284738
NCBI-ProteinID:
XP_028083484
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MGSSNIRDILTSFSPSSDFFAISSGDGRIKIWDTVKGHVQTEFSDIVSTGGSGTNLFGKP
ERGHLSVDYTCMKWLSLDKKKKRKIGSSLLVLGTGSGDVLALDASAGQLKWRVSDCHPGG
VSAISFPTHDSCIYTAGVDGIICKLDSMSGNLLEKFRAATKAISSMSVSSDGKTIATAAA
QLKVFNCSDHTKIQKFSGHPGAVRCMIFTDDGKYILSSAVAERYVAVWKLDGGKKQSSCC
VLTMDHPAVFLDCRHIDDGDVDASGFYVLAISEIGICYFWYGKNIEELRNTKPTKVSLSL
DGQFSKSHKGAVTTIFAAKLQGIAKPASGHIFLAHGLLIKPSFEKILVHSGTDIRLNSSS
DGLLLPISQSRKSKKGSNAHNEVSALDRANAEDALLPIPKILDFHDKKKRHQNSSVVPDE
VMVDNLVDSQRRAQAKRDDMGDVEDTPTICMEDRLRTLGILGNKDDHTPIDSTKLRGINI
EVNLPQKKMRAAILSMVPSDAYKLLEVLLAKWQSRSCSGKYVLPWIYCILVNHSDYIISQ
EPVTQLLETLNKLTKSKEASIQSLLQLSGRLQLVTAQIDKAAQNEGNSFLHDRQMDESED
DDDDVDEFLYGEEDKESQSSSEDED
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcaaatatcagagacatcttgacttcgttcagtccttcttcggatttcttc
gctatcagttccggagatggtcgaattaagatctgggacactgtcaagggccatgtccag
actgagttttctgatatcgtgtcgactggtggaagtggaactaatttatttggtaaacca
gaaaggggtcacctttcggttgattatacttgcatgaagtggctgtctttagacaaaaag
aaaaaaaggaagattggaagttcattgttggtgttggggaccggcagtggcgacgttcta
gcactggatgcatcagctggtcaattgaagtggagagttagtgattgccatcccgggggt
gttagtgccatttcatttccaacacacgattcatgcatttacacggcgggtgtggatggc
ataatttgcaaactagattccatgtcaggaaacttgttagagaagttcagagctgctacg
aaggcaatatcttctatgtctgtttcatcagatgggaagacaatagcaactgcggctgct
cagctgaaggttttcaattgttcagatcatacaaagatacagaagttttcaggccatcct
ggggctgtccgttgtatgatcttcaccgatgatgggaaatacattctttcttctgctgtt
gctgaacgttacgttgcagtttggaaactagacggtggcaaaaagcaatcatcctgttgt
gttcttacaatggaccaccctgctgtttttctggattgcagacatattgatgatggggat
gtagatgcttcaggtttctatgttttggccatctcggaaattggtatttgctatttttgg
tatggaaagaatattgaggaattacgcaataccaagccaacgaaggtctccttgtctctt
gatggccagttctctaagagtcataagggtgcagtaactactatatttgctgcaaaatta
caaggcatcgccaaacctgcctctgggcacatatttttggcccatggtttgctaataaag
ccatcatttgagaaaatcttagtgcattctggcacagacataagattaaacagttcctcg
gatggactccttctcccaatcagtcagtctcgcaagtctaaaaaagggtcaaatgcacat
aatgaagttagtgcactagaccgtgcaaatgcagaagatgctctacttccaattcctaag
attcttgattttcatgacaaaaagaaaagacatcaaaattcaagtgttgtcccagatgag
gtgatggttgataatttggtcgacagccagaggcgagctcaggcaaagagagatgacatg
ggtgatgttgaagacactcctactatttgcatggaggaccggttaaggaccttaggtata
ctaggtaataaggatgatcatacaccaattgattctacaaagttgaggggcatcaatatt
gaagttaatctgccacaaaagaagatgagggcagctattttatccatggtacctagtgat
gcttacaagttattggaagtcttgttggccaagtggcagtcaagatcatgcagcggaaag
tatgttcttccctggatttattgtatattggtaaatcacagtgattacatcatatctcaa
gaaccagtgacccaattactggaaaccttaaacaagcttaccaagtccaaagaggcgtct
attcagtctttattgcagttatcaggtcgtttgcaactagtaacagcacagattgataag
gctgctcagaatgaaggtaatagctttctgcatgatcgccagatggatgaaagtgaagat
gacgacgatgatgttgatgaatttctctatggtgaagaagataaagaatcccaaagcagt
agtgaggatgaagactag
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