Camellia sinensis (tea plant): 114284858
Help
Entry
114284858 CDS
T07364
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114284858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114284858
03012 Translation factors [BR:
csin03012
]
114284858
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114284858
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114284858
Translation factors [BR:
csin03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114284858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
T2SSE
NACHT
ATPase
NPHP3_N
AAA_16
Dicer_dimer
nSTAND3
Motif
Other DBs
NCBI-GeneID:
114284858
NCBI-ProteinID:
XP_028083612
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MPYSSIFIHNYLRTCPYLTISLRQPKPTLLSPPPSSLHLRRRFHFSPKTTTLLRPQPPPP
SRLFHPVRCPRLSSAFAVSCSAAPTGRSTLVFKQQSDACFPNFYNQSSWYGRLAYDEYAS
EDSDGEIEPRQLCASTLDNIEEWKWKLTMLMRDKDEQEVVSRERKDRRDFDQLSAMATRM
GLYSRQYSKVIVISKVPLPNYRSDLDDKRPQREVVLPLGLQREVDSHLRGYISSKSVNKE
NFSDNTFSRSSSSSSLVSDGVHEQEEPVIRNSIAAEKILQRKSLQLRNRQQHWQESPEGQ
KMVEFRRSLPAYKARDALLNSISQNQVMVVSGETGCGKTTQLPQYILESEIEAARGAACS
IICTQPRRISAMSVAERVAAERGENLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLV
DRNLKGITHVIVDEIHERGMNEDFLLIVLKELLPRRPELRLILMSATLNAELFSSYFGGA
PMIHIPGFTHPVRSQFLENILEMTGYRLNPYNQIDNYGQEKKWKMEKQAIRKRKSQIASA
VEDALEAADFREYSPRTRESLSCWNPDSIGFNLIEHVLCHIIKKERPGAVLVFMTGWDDI
NSLKDQLQGHPLLGDPSKVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITI
NDVVFVVDCGKAKETSYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYHLYPRCVY
DAFADYQLPELLRTPLQSLCLQIKSLQLGSISDFLSRALQPPEPLSVQNAIEYLMIIGAL
DENENLTVLGRNLSMLPVEPKLGKMLLLGAIFNCLDPMMTVVAGLSVRDPFLMPFDKKDL
AESAKAQFSARDYSDHLALVRAYDGWKDAERRQSGYEYCWRNFLSAQTLKAIDSLRKQFF
FLLMDTGLVDNNTEMCNAWSHDEHLIRAIICAGLFPGICSVVNKEKSISLKTMEDGQVLL
YSNSVNAQEPKIPYPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGGKISRGGLDGHLKML
GGYLEFFMKPSLADTYLRLKNELEELIQMKLLNSKLEIKNHNELLSAVRLLVSEDQCEGR
FVFGRQVPTSSKKITKEMLPSTPLRSIDGGGDNSKNELQTLLARAGHGAPTYKTTQLKNN
KFRSTVIFNGLNFVGQPSNNKKLAEKSAAAQALQWLTGDETRSPQKTVDHMAMLLKKSKK
KRQVNATKWR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgccttactcttcaatcttcattcacaactacctcagaacctgcccttacctcaccatc
tctctccgacaacccaaacccaccctcctctctccaccaccctcctctctccacctccgt
cgccgcttccatttttcccctaaaaccaccactcttctccgcccccaaccgccgccgccg
tcgcggttgttccaccccgtccgctgcccccgcctgagttccgcctttgctgtctcttgc
tcggcggctccgactggtcgctctactctggtttttaagcagcagagcgatgcttgtttt
cctaatttttataatcagagctcgtggtatggtcggctggcctacgatgagtatgcttct
gaggattctgatggggaaatcgagcctcggcaattgtgcgcttcaacccttgataacatt
gaggagtggaagtggaagttaaccatgcttatgcgtgacaaagatgaacaagaagtggtg
tcgagggagagaaaagatagacgtgattttgatcaactctcagcaatggcaaccagaatg
ggtttatatagccgccagtattcaaaagtaattgttataagtaaggtcccactgccgaat
tacagatctgatctggatgataagcgtccacagagggaggttgtcttacctctcgggtta
caaagagaagtagactcccatcttagaggatacatttctagcaagtctgtcaacaaggaa
aacttttcagataataccttttctagatcaagcagtagcagcagtcttgtttctgatgga
gttcatgagcaggaggagcctgtgatacggaacagcattgcagcagagaagatccttcag
cgcaaaagcttgcaactgcgcaataggcaacaacattggcaggaatctccggaaggccag
aagatggtagaatttcgtagaagtctcccagcatataaagcgagagatgcattattaaac
tccatttcacaaaatcaggtgatggttgtatctggtgaaacaggatgtggtaagaccaca
caacttcctcaatacatcttggagtctgaaattgaagctgctcgtggagctgcctgtagt
attatttgtactcagcccagacgtatttctgctatgtcagttgccgaaagagttgctgca
gagcgaggagagaatcttggagaatctgttggttataaagtacggttagagggaatgaaa
ggaagggatactcgccttcttttttgcaccaccggcattttgttaaggagattgcttgtt
gacagaaacttgaaagggataactcatgtgattgttgatgagattcatgaacgtgggatg
aatgaagattttctccttatcgtcctaaaggagctccttcctcgtcggccagaattgagg
ttgattttgatgagtgcaaccctgaatgctgagcttttctcctcatactttggtggtgct
cctatgatccatattcctggctttacgcacccagttcgaagtcagtttctggagaacatt
ttggaaatgactgggtataggctaaatccatataatcaaattgataattatggtcaagaa
aagaagtggaaaatggagaaacaagctatcagaaagaggaagagccaaattgcttcagct
gtagaggatgcacttgaagctgctgattttagggaatatagtccacgaactcgggaatct
ttatcctgttggaatccagattcaattggctttaatctcattgaacacgtgctttgccat
attattaaaaaggaaaggcctggtgctgttttggtgtttatgactggttgggatgatata
aattctttgaaagatcagctccaaggtcatccactcttgggagatccaagcaaagttttg
ctgcttgcatgccatggttccatggctagctctgagcagaggttaatattcgataagcct
gaagatggagttagaaaaatagttctggccactaacatggctgagacaagcatcacaatt
aatgatgtggtctttgtggttgactgtggaaaggcgaaagagacatcatatgatgctctg
aataacactccatgtctgcttccttcatggatctcaaaggcttccgctcggcagagaaga
ggtagagctggtcgtgttcaaccgggcgagtgttaccatctctatccccgatgtgtatat
gatgcttttgctgattatcaacttcctgaacttctaaggacaccgttgcagtctctatgc
ttgcaaatcaaaagcttacaacttgggagtatctccgatttcctatcaagggccttgcag
ccaccagagcctttatctgttcaaaatgcgattgaatatttgatgatcattggggctttg
gatgagaatgaaaatctaactgttctaggacgaaacttgtcaatgcttccagttgagccc
aaactggggaaaatgctcttattaggagctattttcaactgcctagatccaatgatgact
gttgttgctggtctaagtgtcagagatccattcttgatgccatttgacaagaaggatctt
gcagagtccgcaaaggcccagttctctgcccgtgattatagtgaccatcttgctcttgtc
cgggcttatgatggttggaaagatgctgaaagacgtcaatctggttacgagtattgttgg
agaaattttctttctgcacaaactctgaaagcgattgactcccttcggaagcaattcttt
tttttgctcatggacactggtctggttgataacaatacagaaatgtgcaacgcatggagc
catgatgagcatctaatccgagccatcatctgtgctggtctgttccctggcatatgctct
gttgtgaacaaagagaagtctatatcattgaaaacaatggaggatggtcaggtacttctg
tactcgaattctgtgaatgcccaggaacccaaaattccatacccttggctggttttcaat
gacaaggttaaagtgaattcagtatttctccgggattcaactgcggtatctgattctgtt
cttctcttatttggaggaaaaatttctagaggcggcctggatggacacttgaaaatgttg
ggaggatacttggagtttttcatgaaaccttccttggcagatacatatctaagattgaag
aatgagcttgaagaacttattcaaatgaaacttttgaattccaagctggaaataaaaaat
cacaatgagcttctgtcagcggtaagactattggtatcagaggatcaatgtgaaggtaga
tttgtttttggtcgccaggtaccaacatcttcaaaaaagatcacaaaagagatgctgcca
agcacgcccttgagaagtattgatggtggtggtgataattccaagaacgagctccaaaca
ttgcttgccagggctggacacggagcacccacctacaaaacaacccaactgaaaaacaac
aagtttcgttctactgtgatttttaacggattgaactttgttggccagccttccaacaat
aagaaacttgcagaaaagagtgcagcggctcaagctctacaatggttgacaggtgatgaa
actcggtcacctcagaaaactgttgatcatatggcaatgcttttaaagaagagcaaaaag
aaacgccaagtcaatgctactaagtggaggtag
DBGET
integrated database retrieval system
